RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 OR51B6Q9H340 312 aa12.22□□□□□ -0.45
USP44-203ENST00000537435 RIMS4Q9H426 269 aaPredicted RBP12.22□□□□□ -0.45
USP44-203ENST00000537435 PLK3Q9H4B4 646 aa12.22□□□□□ -0.45
USP44-203ENST00000537435 hCG_1809904A0A1W2PP81 198 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 A0A1W2PR64 198 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 A0A1W2PRV1 198 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 RBFOX3A6NFN3 312 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 ANKRD30BLA7E2S9 258 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 S100A6P06703 90 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 MMP9P14780 707 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 RUNX1Q01196 453 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 BAXQ07812 192 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 ZNF154Q13106 437 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 SOHLH1Q5JUK2 328 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 LINC00696Q6ZRV3 163 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 NUFIP2Q7Z417 695 aaKnown RBP12.21□□□□□ -0.45
USP44-203ENST00000537435 FAM24BQ8N5W8 94 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 TMEM251Q8N6I4 163 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 SNIP1Q8TAD8 396 aaKnown RBP12.21□□□□□ -0.45
USP44-203ENST00000537435 IL22RA2Q969J5 263 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 FOXJ2Q9P0K8 574 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 TAAR3PQ9P1P4 343 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 PUS1Q9Y606 427 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP44-203ENST00000537435 TRAV24A0A0B4J272 114 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 A0A0G2JRQ6 117 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 A0A1W2PPE3 182 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 C5orf52A6NGY3 159 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 ACAA1P09110 424 aaPredicted RBP12.21□□□□□ -0.45
USP44-203ENST00000537435 CBR1P16152 277 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 F2RP25116 425 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 PLGLB1Q02325 96 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 LINC00596Q86U02 117 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 GTF3AQ92664 365 aaKnown RBP12.21□□□□□ -0.45
USP44-203ENST00000537435 SMDT1Q9H4I9 107 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 OPA3Q9H6K4 179 aa12.21□□□□□ -0.45
USP44-203ENST00000537435 COL27A1Q8IZC6 1860 aaPredicted RBP12.2□□□□□ -0.46
USP44-203ENST00000537435 RAB5AP20339 215 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 WNT5AP41221 380 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 PAX9P55771 341 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 HLA-DRB3P79483 266 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 ZNF324BQ6AW86 544 aaPredicted RBP12.2□□□□□ -0.46
USP44-203ENST00000537435 OR8G5Q8NG78 346 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 OR51H1Q8NH63 302 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 OR10J5Q8NHC4 309 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 GNPNAT1Q96EK6 184 aaPredicted RBP12.2□□□□□ -0.46
USP44-203ENST00000537435 DDA1Q9BW61 102 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 ABI3Q9P2A4 366 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 OR2W1Q9Y3N9 320 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 RNF115Q9Y4L5 304 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 TNRC6AQ8NDV7 1962 aaKnown RBP12.2□□□□□ -0.46
USP44-203ENST00000537435 TRBV6-6A0A0A6YYG2 114 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 ZNF14P17017 642 aaPredicted RBP12.2□□□□□ -0.46
USP44-203ENST00000537435 APLNRP35414 380 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 GNG3P63215 75 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 IGFBP7Q16270 282 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 ZNF573Q86YE8 665 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 MCEMP1Q8IX19 187 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 FAM58AQ8N1B3 248 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 GPR146Q96CH1 333 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 DLL3Q9NYJ7 618 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 PRSS50Q9UI38 385 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 ERRFI1Q9UJM3 462 aaPredicted RBP12.2□□□□□ -0.46
USP44-203ENST00000537435 MPC1Q9Y5U8 109 aa12.2□□□□□ -0.46
USP44-203ENST00000537435 OR5B21A6NL26 309 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 RHBDL1O75783 438 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 S100GP29377 79 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 HAGHQ16775 308 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 HIKESHIQ53FT3 197 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 AKR1C8PQ5T2L2 129 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 H1FOOQ8IZA3 346 aaPredicted RBP12.19□□□□□ -0.46
USP44-203ENST00000537435 KIAA1456Q9P272 454 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 AHCTF1Q8WYP5 2266 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 BTBD17A6NE02 478 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 ARGFXA6NJG6 315 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 H3BP45 60 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 UBE2CO00762 179 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 PSG2P11465 335 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 IL24Q13007 206 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 DCAF10Q5QP82 559 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 OR2T2Q6IF00 324 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 ADAM5Q6NVV9 412 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 ZNF880Q6PDB4 577 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 IL1F10Q8WWZ1 152 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 ATP5SQ99766 215 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 C12orf49Q9H741 205 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 LIPGQ9Y5X9 500 aa12.19□□□□□ -0.46
USP44-203ENST00000537435 SERPINE2P07093 398 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 CA6P23280 308 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 CEBPGP53567 150 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 CLN3Q13286 438 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 RNPS1Q15287 305 aaKnown RBP12.18□□□□□ -0.46
USP44-203ENST00000537435 IZUMO4Q1ZYL8 232 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 DBX2Q6ZNG2 339 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 CABLES2Q9BTV7 478 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 IFT22Q9H7X7 185 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 A0A1W2PNU3 283 aaPredicted RBP12.18□□□□□ -0.46
USP44-203ENST00000537435 CEACAM1P13688 526 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 RPS23P62266 143 aaKnown RBP12.18□□□□□ -0.46
USP44-203ENST00000537435 SPATA46Q5T0L3 261 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 SP5Q6BEB4 398 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms