RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ZNF468Q5VIY5 522 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 OTOSQ8NHW6 89 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 LIN37Q96GY3 246 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 LINC00615Q96LM1 132 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 VN1R1Q9GZP7 353 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 TRAV1-1A0A0B4J248 108 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 IGHV1-69-2A0A0G2JMI3 117 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 A0A1W2PR77 199 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 ZNF732B4DXR9 585 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 IFNL4K9M1U5 179 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 MYF5P13349 255 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 DUSP2Q05923 314 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 PCK2Q16822 640 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 MRGPRGQ86SM5 289 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 FBXL14Q8N1E6 418 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 SCGB1C1Q8TD33 95 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 GPER1Q99527 375 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 SPIN2AQ99865 258 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 SPIN2BQ9BPZ2 258 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 CEP250Q9BV73 2442 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 LOC107986453A0A1B0GWG9 222 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 PSG1P11464 419 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 GZMHP20718 246 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 TDRG1Q3Y452 100 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 Q6ZWC4 215 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 KCNG3Q8TAE7 436 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 THADAQ6YHU6 1953 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 FAM24AA6NFZ4 105 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 MSTNO14793 375 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 CDS2O95674 445 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 S100GP29377 79 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 RPS27P42677 84 aaKnown RBP9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 LCN15Q6UWW0 184 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 ZNF793Q6ZN11 406 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 LHFPL1Q86WI0 220 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 C1orf174Q8IYL3 243 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 ARHGEF39Q8N4T4 335 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 WDYHV1Q96HA8 205 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 TMEM56Q96MV1 263 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 SLC5A6Q9Y289 635 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 TMEM56-RWDD3S4R434 201 aa9.46□□□□□ -0.89
CLSTN3-207ENST00000537408 VSIG8P0DPA2 414 aa9.46□□□□□ -0.9
CLSTN3-207ENST00000537408 FOXK1P85037 733 aa9.46□□□□□ -0.9
CLSTN3-207ENST00000537408 ABHD17BQ5VST6 288 aa9.46□□□□□ -0.9
CLSTN3-207ENST00000537408 ABHD12BQ7Z5M8 362 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-207ENST00000537408 PNKDQ8N490 385 aa9.46□□□□□ -0.9
CLSTN3-207ENST00000537408 CALHM2Q9HA72 323 aa9.46□□□□□ -0.9
CLSTN3-207ENST00000537408 PI4KAP42356 2102 aa9.46□□□□□ -0.9
CLSTN3-207ENST00000537408 EMC4Q5J8M3 183 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 CDRT4Q8N9R6 151 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 LINC01555Q8NAE3 123 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 PARLQ9H300 379 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 HYPMO75409 117 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 KBTBD11O94819 623 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 IGLC2P0DOY2 106 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 IGLC3P0DOY3 106 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 CRISP2P16562 243 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 SPINK2P20155 84 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 COMPP49747 757 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 FAM78BQ5VT40 261 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 OR5C1Q8NGR4 320 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 GPR146Q96CH1 333 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 TMEM59Q9BXS4 323 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 CRYM-AS1A6NIL9 109 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 H7C1C5 153 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 GCH1P30793 250 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 PLPPR5Q32ZL2 321 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 C1orf140Q5VVS0 124 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 DAZLQ92904 295 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 AGMATQ9BSE5 352 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 FAM103A1Q9BTL3 118 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 CENPMQ9NSP4 180 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 IGHV1OR21-1A0A087WYE8 117 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 J3QW42 95 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 CORTO00230 105 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 LDB3O75112 727 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF20P17024 532 aa9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 LSRQ86X29 649 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 GPX7Q96SL4 187 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-207ENST00000537408 NGFRP08138 427 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 CD59P13987 128 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 RBPJQ06330 500 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 FHL1Q13642 323 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 IL11RAQ14626 422 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 PRSS8Q16651 343 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF665Q9H7R5 613 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 CLEC5AQ9NY25 188 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 OR6C6A6NF89 314 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 LILRA1O75019 489 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 BCL6P41182 706 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 NKX2-1P43699 371 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 PSMB3P49720 205 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 BAXQ07812 192 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 UNC119Q13432 240 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 CPT1CQ8TCG5 803 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 NAA60Q9H7X0 242 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 VAMP5O95183 116 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 MT-CO2P00403 227 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 STAG3L3P0CL85 134 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 GP1BBP13224 206 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms