RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 FOXB1Q99853 325 aa18.43■□□□□ 0.54
TRIM3-214ENST00000536344 RBFOX3A6NFN3 312 aa18.43■□□□□ 0.54
TRIM3-214ENST00000536344 NDUFAF3Q9BU61 184 aa18.43■□□□□ 0.54
TRIM3-214ENST00000536344 TMEM38BQ9NVV0 291 aa18.43■□□□□ 0.54
TRIM3-214ENST00000536344 BSNQ9UPA5 3926 aa18.42■□□□□ 0.54
TRIM3-214ENST00000536344 ELOA3CA0A087WX78 387 aaPredicted RBP18.42■□□□□ 0.54
TRIM3-214ENST00000536344 CCL2P13500 99 aa18.42■□□□□ 0.54
TRIM3-214ENST00000536344 P2RY1P47900 373 aa18.42■□□□□ 0.54
TRIM3-214ENST00000536344 GPR35Q9HC97 309 aa18.42■□□□□ 0.54
TRIM3-214ENST00000536344 C1orf123Q9NWV4 160 aa18.42■□□□□ 0.54
TRIM3-214ENST00000536344 MRPS18CQ9Y3D5 142 aaKnown RBP18.42■□□□□ 0.54
TRIM3-214ENST00000536344 M0R135 149 aa18.42■□□□□ 0.54
TRIM3-214ENST00000536344 FAHP16930 419 aa18.42■□□□□ 0.54
TRIM3-214ENST00000536344 ZNF799Q96GE5 643 aa18.42■□□□□ 0.54
TRIM3-214ENST00000536344 SPRR3Q9UBC9 169 aa18.42■□□□□ 0.54
TRIM3-214ENST00000536344 DNPH1O43598 174 aa18.41■□□□□ 0.54
TRIM3-214ENST00000536344 SCAF4O95104 1147 aaKnown RBP18.41■□□□□ 0.54
TRIM3-214ENST00000536344 TNFSF10P50591 281 aa18.41■□□□□ 0.54
TRIM3-214ENST00000536344 SOX8P57073 446 aa18.41■□□□□ 0.54
TRIM3-214ENST00000536344 MRPS34P82930 218 aaKnown RBP18.41■□□□□ 0.54
TRIM3-214ENST00000536344 LBHQ53QV2 105 aaPredicted RBP18.41■□□□□ 0.54
TRIM3-214ENST00000536344 FAM27BQ5VT28 67 aa18.41■□□□□ 0.54
TRIM3-214ENST00000536344 K7N7A8 449 aa18.41■□□□□ 0.54
TRIM3-214ENST00000536344 SYNGR4O95473 234 aa18.41■□□□□ 0.54
TRIM3-214ENST00000536344 SRP19P09132 144 aaKnown RBP18.41■□□□□ 0.54
TRIM3-214ENST00000536344 CCNOP22674 350 aa18.41■□□□□ 0.54
TRIM3-214ENST00000536344 SLC16A14Q7RTX9 510 aa18.41■□□□□ 0.54
TRIM3-214ENST00000536344 P4HA3Q7Z4N8 544 aa18.41■□□□□ 0.54
TRIM3-214ENST00000536344 C1orf147Q96MC9 270 aaPredicted RBP18.41■□□□□ 0.54
TRIM3-214ENST00000536344 SNHG12Q9BXW3 62 aa18.41■□□□□ 0.54
TRIM3-214ENST00000536344 TUBD1Q9UJT1 453 aa18.41■□□□□ 0.54
TRIM3-214ENST00000536344 FIGNL2A6NMB9 653 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 CD200P41217 278 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 RRADP55042 308 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 GRB2P62993 217 aaKnown RBP18.4■□□□□ 0.54
TRIM3-214ENST00000536344 SPSB3Q6PJ21 355 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 FAM210BQ96KR6 192 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 SIRT7Q9NRC8 400 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 BORCS7-ASMTA0A0B4J1R7 106 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 CDC14BO60729 498 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 FUT3P21217 361 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 NBL1P41271 181 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 PSG4Q00888 419 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 NUFIP2Q7Z417 695 aaKnown RBP18.4■□□□□ 0.54
TRIM3-214ENST00000536344 OR5D14Q8NGL3 314 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 OR5R1Q8NH85 324 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 HAS2Q92819 552 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 MRPS28Q9Y2Q9 187 aaKnown RBP18.4■□□□□ 0.54
TRIM3-214ENST00000536344 ZZEF1O43149 2961 aa18.4■□□□□ 0.54
TRIM3-214ENST00000536344 CRTAPO75718 401 aaPredicted RBP18.39■□□□□ 0.53
TRIM3-214ENST00000536344 ZNF25P17030 456 aaPredicted RBP18.39■□□□□ 0.53
TRIM3-214ENST00000536344 OR52M1Q8NGK5 317 aa18.39■□□□□ 0.53
TRIM3-214ENST00000536344 HSF4Q9ULV5 492 aa18.39■□□□□ 0.53
TRIM3-214ENST00000536344 ANAPC10Q9UM13 185 aa18.39■□□□□ 0.53
TRIM3-214ENST00000536344 KCNIP3Q9Y2W7 256 aa18.39■□□□□ 0.53
TRIM3-214ENST00000536344 CD82P27701 267 aa18.39■□□□□ 0.53
TRIM3-214ENST00000536344 JOSD1Q15040 202 aaPredicted RBP18.39■□□□□ 0.53
TRIM3-214ENST00000536344 SGPP2Q8IWX5 399 aa18.39■□□□□ 0.53
TRIM3-214ENST00000536344 MCTS1Q9ULC4 181 aaKnown RBP18.39■□□□□ 0.53
TRIM3-214ENST00000536344 IGF2RP11717 2491 aa18.39■□□□□ 0.53
TRIM3-214ENST00000536344 IFNL4K9M1U5 179 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 HLA-HP01893 362 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 AMBPP02760 352 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 CEACAM1P13688 526 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 CEACAM6P40199 344 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 ZNF133P52736 654 aaPredicted RBP18.38■□□□□ 0.53
TRIM3-214ENST00000536344 ARF1P84077 181 aaKnown RBP18.38■□□□□ 0.53
TRIM3-214ENST00000536344 CLN3Q13286 438 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 LYZL2Q7Z4W2 148 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 C14orf166Q9Y224 244 aaKnown RBP18.38■□□□□ 0.53
TRIM3-214ENST00000536344 TRGV5A0A0B4J1U4 118 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 LCATP04180 440 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 GLIPR1P48060 266 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 PCP4P48539 62 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 FOXL2NBQ6ZUU3 175 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 GCNT2Q8N0V5 402 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 TMEM59Q9BXS4 323 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 NBEAQ8NFP9 2946 aa18.38■□□□□ 0.53
TRIM3-214ENST00000536344 IGKV1-9A0A0C4DH69 117 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 MMP7P09237 267 aaPredicted RBP18.37■□□□□ 0.53
TRIM3-214ENST00000536344 ZNF880Q6PDB4 577 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 CPT1CQ8TCG5 803 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 EMG1Q92979 244 aaKnown RBP18.37■□□□□ 0.53
TRIM3-214ENST00000536344 PIGTQ969N2 578 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 SCGB3A2Q96PL1 93 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 GPER1Q99527 375 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 PLEKHA2Q9HB19 425 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 ZNF701Q9NV72 531 aaPredicted RBP18.37■□□□□ 0.53
TRIM3-214ENST00000536344 ZNF503-AS2A6NEH8 195 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 FGF7P21781 194 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 RAB4BP61018 213 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 OR5AS1Q8N127 324 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 ZNF2Q9BSG1 426 aaPredicted RBP18.37■□□□□ 0.53
TRIM3-214ENST00000536344 HDHD3Q9BSH5 251 aaPredicted RBP18.37■□□□□ 0.53
TRIM3-214ENST00000536344 PIGLQ9Y2B2 252 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 GTF3C1Q12789 2109 aa18.37■□□□□ 0.53
TRIM3-214ENST00000536344 E5RGE8 158 aa18.36■□□□□ 0.53
TRIM3-214ENST00000536344 MBP02144 154 aa18.36■□□□□ 0.53
TRIM3-214ENST00000536344 GSTP1P09211 210 aaKnown RBP18.36■□□□□ 0.53
TRIM3-214ENST00000536344 DNLZQ5SXM8 178 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms