RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 OR6C6A6NF89 314 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 IGLON5A6NGN9 336 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 NPIPB15A6NHN6 443 aaPredicted RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 E5RGE8 158 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 G3V3Y1 287 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 H3BQ15 152 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 CLDN34H7C241 214 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 ZNHIT1O43257 154 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 FCMRO60667 390 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 YPEL1O60688 119 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 DUSP11O75319 330 aaKnown RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 CNMDO75829 334 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 S1PR2O95136 353 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 CDS2O95674 445 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 SEMA4FO95754 770 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 CD160O95971 181 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 GAPDHP04406 335 aaKnown RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 EDN1P05305 212 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 HLA-DQB2P05538 268 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 CTSDP07339 412 aaPredicted RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 RAB40ALP0C0E4 278 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 LINC00032P0C843 101 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 IGLC1P0CG04 106 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 PET100P0DJ07 73 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 MPC1LP0DKB6 136 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 CEACAM1P13688 526 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 CTSEP14091 401 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 TM4SF1P30408 202 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 KDELR2P33947 212 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 GABRA3P34903 492 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 LPAR6P43657 344 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 FASLGP48023 281 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 NPBWR2P48146 333 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 HNRNPA3P51991 378 aaKnown RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 TAS2R43P59537 309 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 BTN3A2P78410 334 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 DHRS2Q13268 280 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 KIAA0040Q15053 153 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 RGNQ15493 299 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 HIST3H3Q16695 136 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 UPP1Q16831 310 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 C2orf68Q2NKX9 166 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 IAH1Q2TAA2 248 aaPredicted RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 CCSMST1Q4G0I0 132 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 DUSP28Q4G0W2 176 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 PDLIM3Q53GG5 364 aaPredicted RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 TRMT12Q53H54 448 aaKnown RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 LY6G6FQ5SQ64 297 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 C6orf136Q5SQH8 315 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 SERTAD4-AS1Q5TG53 156 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 FAM78BQ5VT40 261 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 AADACL3Q5VUY0 350 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 ZNF776Q68DI1 518 aaPredicted RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 TMEM42Q69YG0 159 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 RTL6Q6ICC9 239 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 TMEM182Q6ZP80 229 aaPredicted RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 DNM1P46Q6ZS02 220 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 NEGR1Q7Z3B1 354 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 ACOT1Q86TX2 421 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 GKN2Q86XP6 184 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 DOLPP1Q86YN1 238 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 KLHDC8AQ8IYD2 350 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 OR8I2Q8N0Y5 310 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 SLC39A11Q8N1S5 342 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 C5orf17Q8NAS9 161 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 SUMF2Q8NBJ7 301 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 NPEPL1Q8NDH3 523 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 ST6GALNAC3Q8NDV1 305 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 OR8G5Q8NG78 346 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 OR51A2Q8NGJ7 313 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 OR10G4Q8NGN3 311 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 OR1N2Q8NGR9 330 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 OR2T27Q8NH04 317 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 OR4X1Q8NH49 305 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 OR52I2Q8NH67 350 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 OR5K2Q8NHB8 316 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 OR2T6Q8NHC8 308 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 MFSD8Q8NHS3 518 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 RHEBL1Q8TAI7 183 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 GPR119Q8TDV5 335 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 PPP1R1CQ8WVI7 109 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 PSMF1Q92530 271 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 PIGTQ969N2 578 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 FAM46BQ96A09 425 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 PTH2Q96A98 100 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 APH1AQ96BI3 265 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 PPCDCQ96CD2 204 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 S100A16Q96FQ6 103 aaKnown RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 ATXN7L3BQ96GX2 97 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 ZNF582Q96NG8 517 aaPredicted RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 LRRC3BQ96PB8 259 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 AQP10Q96PS8 301 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 YPEL2Q96QA6 119 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 TSPAN32Q96QS1 320 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 NPY6RQ99463 290 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 GABRG3Q99928 467 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 ZNF670Q9BS34 389 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 DOHHQ9BU89 302 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 C20orf24Q9BUV8 137 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 NUDT9Q9BW91 350 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms