RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 Q9N2K0 584 aa5.67□□□□□ -1.5
USP28-202ENST00000535607 ZNF701Q9NV72 531 aaPredicted RBP5.67□□□□□ -1.5
USP28-202ENST00000535607 MRPL22Q9NWU5 206 aaKnown RBP5.67□□□□□ -1.5
USP28-202ENST00000535607 P4HTMQ9NXG6 502 aa5.67□□□□□ -1.5
USP28-202ENST00000535607 NAT8Q9UHE5 227 aa5.67□□□□□ -1.5
USP28-202ENST00000535607 PILRBQ9UKJ0 227 aa5.67□□□□□ -1.5
USP28-202ENST00000535607 POLR1DQ9Y2S0 133 aa5.67□□□□□ -1.5
USP28-202ENST00000535607 URGCP-MRPS24S4R325 110 aa5.67□□□□□ -1.5
USP28-202ENST00000535607 FANCMQ8IYD8 2048 aa5.67□□□□□ -1.5
USP28-202ENST00000535607 TMED7-TICAM2A0A0A6YYA0 188 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 KIR2DS5A0A0G2JLQ3 304 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 A0A0G2JNG1 304 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 A0A1B0GU03 582 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 A6NCN8 305 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 ZNF850A8MQ14 1090 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 ZNF727A8MUV8 499 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 STMND1H3BQB6 276 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 KIR2DS3K7RE56 304 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 SOCS1O15524 211 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 DLEU1O43261 78 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 RAMP1O60894 148 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 TNFP01375 233 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 TTRP02766 147 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 QDPRP09417 244 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 CT45A8P0DMV1 189 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 CT45A9P0DMV2 189 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 CTLA4P16410 223 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 ZNF25P17030 456 aaPredicted RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 ZNF43P17038 809 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 WT1P19544 449 aaPredicted RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 PTGER4P35408 488 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 SRP14P37108 136 aaKnown RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 APOBEC1P41238 236 aaKnown RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 RPS27P42677 84 aaKnown RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 NKX2-1P43699 371 aaPredicted RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 PDLIM4P50479 330 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 IDH3GP51553 393 aaPredicted RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 ZNF41P51814 821 aaPredicted RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 CASP6P55212 293 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 TAS2R30P59541 319 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 KRTAP10-2P60368 255 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 RPL19P84098 196 aaKnown RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 PAX5Q02548 391 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 EGR4Q05215 589 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 FHL3Q13643 280 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 FAM53BQ14153 422 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 KIR2DS5Q14953 304 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 OR8B8Q15620 311 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 SLC22A6Q4U2R8 563 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 CT45A2Q5DJT8 189 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 PDZD11Q5EBL8 140 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 THEM4Q5T1C6 240 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 C1orf194Q5T5A4 169 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 MOGAT3Q86VF5 341 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 ZNF573Q86YE8 665 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 FBXL14Q8N1E6 418 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 TMEM156Q8N614 296 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 CYB561D1Q8N8Q1 229 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 OR4N2Q8NGD1 307 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 CLDND2Q8NHS1 167 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 C16orf52Q8NHV5 167 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 GLMPQ8WWB7 406 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 RTN4IP1Q8WWV3 396 aaPredicted RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 ERGIC1Q969X5 290 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 MRPL24Q96A35 216 aaKnown RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 PINX1Q96BK5 328 aaKnown RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 DDIT4LQ96D03 193 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 ARSGQ96EG1 525 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 C18orf12Q96KH6 178 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 NRTNQ99748 197 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 AGMATQ9BSE5 352 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 TM2D1Q9BX74 207 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 KLK15Q9H2R5 256 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 PLEKHJ1Q9NW61 149 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 FAM206AQ9NX38 181 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 ANXA10Q9UJ72 324 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 HSF4Q9ULV5 492 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 VDAC3Q9Y277 283 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 RCL1Q9Y2P8 373 aaKnown RBP5.66□□□□□ -1.5
USP28-202ENST00000535607 RHBDD3Q9Y3P4 386 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 LIPGQ9Y5X9 500 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 VPS13AQ96RL7 3174 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 TMEM131Q92545 1883 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 CEP192Q8TEP8 1941 aa5.66□□□□□ -1.5
USP28-202ENST00000535607 ZNF318Q5VUA4 2279 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 KIF26BQ2KJY2 2108 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 WDFY4Q6ZS81 3184 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 CACNA1IQ9P0X4 2223 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 WIPF3A6NGB9 483 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 MBD3L5A6NJ08 208 aaPredicted RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 TMEM150CB9EJG8 249 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 LMO7DNF2Z398 122 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 H7BYZ3 331 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 SDCBPO00560 298 aaPredicted RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 NKX2-8O15522 239 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 TLX3O43711 291 aaPredicted RBP5.65□□□□□ -1.5
USP28-202ENST00000535607 DIRAS3O95661 229 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 SCGB1D1O95968 90 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 HLA-HP01893 362 aa5.65□□□□□ -1.5
USP28-202ENST00000535607 HPNP05981 417 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms