RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 TMEM106BQ9NUM4 274 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 MAP1LC3B2A6NCE7 125 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 OR2J2O76002 312 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 BCL2P10415 239 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 DUSP1P28562 367 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 UBE2NP61088 152 aaKnown RBP16.55■□□□□ 0.24
SMPD1-210ENST00000534405 ARFRP1Q13795 201 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 KLHL24Q6TFL4 600 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 CMTM1Q8IZ96 169 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 STPG4Q8N801 248 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 OR2D3Q8NGH3 330 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 CIB3Q96Q77 187 aaPredicted RBP16.55■□□□□ 0.24
SMPD1-210ENST00000534405 OR5B12Q96R08 314 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 P2RX4Q99571 388 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 MAP1LC3BQ9GZQ8 125 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 C11orf1Q9H5F2 150 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 GNG13Q9P2W3 67 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 SCRG1O75711 98 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 IGHEP01854 428 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 MPV17LQ2QL34 196 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 CARD17Q5XLA6 110 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 GUSBP11Q6P575 273 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 OR2C3Q8N628 320 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 LRTM2Q8N967 370 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 NECAP1Q8NC96 275 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 OR52M1Q8NGK5 317 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 ARHGAP5-AS1Q96IT6 56 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 ZNF319Q9P2F9 582 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 CACNA1EQ15878 2313 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 A0A1W2PQM1 296 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 TMEM238C9JI98 176 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 AQP7O14520 342 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 MPIG6BO95866 241 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 OR5G3P0C626 314 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 TMEM187Q14656 261 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 PRSS8Q16651 343 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 SLC25A53Q5H9E4 307 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 CORO2AQ92828 525 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 ZNF845Q96IR2 970 aaPredicted RBP16.54■□□□□ 0.24
SMPD1-210ENST00000534405 VAMP8Q9BV40 100 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 UBE2ZQ9H832 354 aaPredicted RBP16.54■□□□□ 0.24
SMPD1-210ENST00000534405 AKIRIN1Q9H9L7 192 aaPredicted RBP16.54■□□□□ 0.24
SMPD1-210ENST00000534405 PAM16Q9Y3D7 125 aa16.54■□□□□ 0.24
SMPD1-210ENST00000534405 CBY3A6NI87 242 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 TRAF3IP2O43734 574 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-210ENST00000534405 HRASP01112 189 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 MTCP1P56278 107 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 GNMTQ14749 295 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 TMEM171Q8WVE6 324 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 PLK3Q9H4B4 646 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 METTL7AQ9H8H3 244 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 DECR2Q9NUI1 292 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 NAT8Q9UHE5 227 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 SLC7A11Q9UPY5 501 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 MRPS17Q9Y2R5 130 aaKnown RBP16.53■□□□□ 0.24
SMPD1-210ENST00000534405 EPHA8P29322 1005 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-210ENST00000534405 CLRN1P58418 232 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 MMDQ15546 238 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 LYZL2Q7Z4W2 148 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 CPEB2Q7Z5Q1 589 aaKnown RBP16.53■□□□□ 0.24
SMPD1-210ENST00000534405 UEVLDQ8IX04 471 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 H1FOOQ8IZA3 346 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-210ENST00000534405 C18orf12Q96KH6 178 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 C1orf147Q96MC9 270 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-210ENST00000534405 CSTL1Q9H114 145 aa16.53■□□□□ 0.24
SMPD1-210ENST00000534405 GLIPR1L1Q6UWM5 242 aa16.52■□□□□ 0.24
SMPD1-210ENST00000534405 TMEM256Q8N2U0 113 aa16.52■□□□□ 0.24
SMPD1-210ENST00000534405 OR5D14Q8NGL3 314 aa16.52■□□□□ 0.24
SMPD1-210ENST00000534405 KCNG3Q8TAE7 436 aa16.52■□□□□ 0.24
SMPD1-210ENST00000534405 CCDC74BQ96LY2 380 aa16.52■□□□□ 0.24
SMPD1-210ENST00000534405 RASL10BQ96S79 203 aa16.52■□□□□ 0.24
SMPD1-210ENST00000534405 AGMATQ9BSE5 352 aa16.52■□□□□ 0.24
SMPD1-210ENST00000534405 B3GALT1Q9Y5Z6 326 aa16.52■□□□□ 0.24
SMPD1-210ENST00000534405 IGSF23A1L1A6 192 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 FAM24AA6NFZ4 105 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 H7BYZ3 331 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 ZNF93P35789 620 aaPredicted RBP16.51■□□□□ 0.23
SMPD1-210ENST00000534405 OR5AS1Q8N127 324 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 POLR1DQ9Y2S0 133 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 ARID1AO14497 2285 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 EML6Q6ZMW3 1958 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 IGLV3-32A0A0A0MS00 114 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 LY6G6EA0A0G2JKS1 128 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 CLEC18AA5D8T8 446 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 RER1O15258 196 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 SYNGR4O95473 234 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 DMRTC1Q5HYR2 192 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 VHLLQ6RSH7 139 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 SPEM1Q8N4L4 309 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 CLEC18CQ8NCF0 446 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 OR2M3Q8NG83 312 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 OR8B12Q8NGG6 310 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 OR4D5Q8NGN0 318 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 IL22RA2Q969J5 263 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 U3KQA8 63 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 RTTNQ86VV8 2226 aa16.51■□□□□ 0.23
SMPD1-210ENST00000534405 NUPR1O60356 82 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 IGHG1P01857 330 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 ZNF17P17021 662 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 TCN2P20062 427 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms