RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 Q5VSD8 79 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 KIR2DL5AQ8N109 375 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 LFNGQ8NES3 379 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 KIR2DL5BQ8NHK3 375 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 OTOSQ8NHW6 89 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 RP9Q8TA86 221 aaKnown RBP7.76□□□□□ -1.17
CSDE1-215ENST00000533818 MRGPRDQ8TDS7 321 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 RDH12Q96NR8 316 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 RARRES2Q99969 163 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 ROPN1BQ9BZX4 212 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-215ENST00000533818 C11orf68Q9H3H3 251 aaKnown RBP7.76□□□□□ -1.17
CSDE1-215ENST00000533818 ROPN1Q9HAT0 212 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-215ENST00000533818 HMG20AQ9NP66 347 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 FAM206AQ9NX38 181 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 TECRQ9NZ01 308 aaKnown RBP7.76□□□□□ -1.17
CSDE1-215ENST00000533818 KIF25Q9UIL4 384 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 FAM32AQ9Y421 112 aaKnown RBP7.76□□□□□ -1.17
CSDE1-215ENST00000533818 DEFB4AO15263 64 aa7.75□□□□□ -1.17
CSDE1-215ENST00000533818 CYB5AP00167 134 aa7.75□□□□□ -1.17
CSDE1-215ENST00000533818 IFNA10P01566 189 aa7.75□□□□□ -1.17
CSDE1-215ENST00000533818 FUT6P51993 359 aa7.75□□□□□ -1.17
CSDE1-215ENST00000533818 Q6ZRM9 215 aa7.75□□□□□ -1.17
CSDE1-215ENST00000533818 LINC00311Q8N616 119 aa7.75□□□□□ -1.17
CSDE1-215ENST00000533818 FRZBQ92765 325 aa7.75□□□□□ -1.17
CSDE1-215ENST00000533818 FAM103A1Q9BTL3 118 aaKnown RBP7.75□□□□□ -1.17
CSDE1-215ENST00000533818 RNF126Q9BV68 326 aa7.75□□□□□ -1.17
CSDE1-215ENST00000533818 EGLN3Q9H6Z9 239 aa7.75□□□□□ -1.17
CSDE1-215ENST00000533818 SSU72Q9NP77 194 aaKnown RBP7.75□□□□□ -1.17
CSDE1-215ENST00000533818 SELENOKQ9Y6D0 94 aa7.75□□□□□ -1.17
CSDE1-215ENST00000533818 SLC33A1O00400 549 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-215ENST00000533818 FOLR2P14207 255 aa7.74□□□□□ -1.17
CSDE1-215ENST00000533818 FCGR2BP31994 310 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-215ENST00000533818 SSTR5P35346 364 aa7.74□□□□□ -1.17
CSDE1-215ENST00000533818 RPS16P62249 146 aaKnown RBP7.74□□□□□ -1.17
CSDE1-215ENST00000533818 LSAMPQ13449 338 aa7.74□□□□□ -1.17
CSDE1-215ENST00000533818 ZNF343Q6P1L6 599 aa7.74□□□□□ -1.17
CSDE1-215ENST00000533818 SNAPC3Q92966 411 aa7.74□□□□□ -1.17
CSDE1-215ENST00000533818 HSH2DQ96JZ2 352 aa7.74□□□□□ -1.17
CSDE1-215ENST00000533818 FUZQ9BT04 418 aa7.74□□□□□ -1.17
CSDE1-215ENST00000533818 TAS2R1Q9NYW7 299 aa7.74□□□□□ -1.17
CSDE1-215ENST00000533818 DHDHQ9UQ10 334 aa7.74□□□□□ -1.17
CSDE1-215ENST00000533818 KLHDC2Q9Y2U9 406 aa7.74□□□□□ -1.17
CSDE1-215ENST00000533818 V9GYS6 101 aa7.74□□□□□ -1.17
CSDE1-215ENST00000533818 A0A0B4J203 849 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 TRAV10A0A0B4J240 114 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 LOC110117498-PIK3R3F6TDL0 507 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 FCN1O00602 326 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 DEGS1O15121 323 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 RPL35AP18077 110 aaKnown RBP7.73□□□□□ -1.17
CSDE1-215ENST00000533818 GSSP48637 474 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 UBE2V2Q15819 145 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 Q6P435 159 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 SLC25A48Q6ZT89 311 aaKnown RBP7.73□□□□□ -1.17
CSDE1-215ENST00000533818 SPATA12Q7Z6I5 190 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 TMEM61Q8N0U2 210 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 C17orf53Q8N3J3 647 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-215ENST00000533818 C8orf31Q8N9H6 132 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 CHST4Q8NCG5 386 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 NPBQ8NG41 125 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 OR2T12Q8NG77 320 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 OR8J3Q8NGG0 315 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 OR51T1Q8NGJ9 327 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 OR14K1Q8NGZ2 314 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 BORCS8Q96FH0 119 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 EBF4Q9BQW3 602 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 CCDC28BQ9BUN5 200 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 NCOR1P1Q9H4R4 102 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 MED20Q9H944 212 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 GAB2Q9UQC2 676 aa7.73□□□□□ -1.17
CSDE1-215ENST00000533818 AGRNO00468 2067 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 TRAV39A0A0B4J263 110 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 C2orf70A6NJV1 201 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 FAM220BPB1ANY3 271 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 SDCBPO00560 298 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-215ENST00000533818 HSPB6O14558 160 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 SELENOFO60613 162 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 E2F6O75461 281 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 SCAF4O95104 1147 aaKnown RBP7.72□□□□□ -1.17
CSDE1-215ENST00000533818 TTRP02766 147 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 EDN2P20800 178 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 AADACP22760 399 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 NUDT2P50583 147 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 PLGLAQ15195 96 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 LINC00596Q86U02 117 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 TCEANCQ8N8B7 351 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 ANKRD42Q8N9B4 389 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 POC5Q8NA72 575 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 BVESQ8NE79 360 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 OR11H2Q8NH07 326 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 OTULINQ96BN8 352 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 COMMD4Q9H0A8 199 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 PARP12Q9H0J9 701 aaKnown RBP7.72□□□□□ -1.17
CSDE1-215ENST00000533818 FAM118AQ9NWS6 357 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 NDUFAF4Q9P032 175 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 NUFIP1Q9UHK0 495 aaKnown RBP7.72□□□□□ -1.17
CSDE1-215ENST00000533818 PLA2G2DQ9UNK4 145 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 CDH10Q9Y6N8 788 aa7.72□□□□□ -1.17
CSDE1-215ENST00000533818 SLC31A2O15432 143 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 DIRAS1O95057 198 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 NDUFA3O95167 84 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms