RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 HOXB4P17483 251 aaPredicted RBP3.31□□□□□ -1.88
ATM-221ENST00000533690 CTRLP40313 264 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 FHITP49789 147 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 PIGPP57054 158 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 TAS2R60P59551 318 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 SERF2P84101 59 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 NHLH2Q02577 135 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 GAGE1Q13065 139 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 AIMP2Q13155 320 aaKnown RBP3.31□□□□□ -1.88
ATM-221ENST00000533690 JOSD1Q15040 202 aaPredicted RBP3.31□□□□□ -1.88
ATM-221ENST00000533690 POU2AF1Q16633 256 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 MRGPRG-AS1Q2M3A8 158 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 C4orf17Q53FE4 359 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 IGSF11Q5DX21 431 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 PMS2CLQ68D20 193 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 EIF5AL1Q6IS14 154 aaKnown RBP3.31□□□□□ -1.88
ATM-221ENST00000533690 ZNF585AQ6P3V2 769 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 C16orf47Q6ZP98 133 aaPredicted RBP3.31□□□□□ -1.88
ATM-221ENST00000533690 LGI3Q8N145 548 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 ZNF611Q8N823 705 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 OR10G9Q8NGN4 311 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 PPP1R35Q8TAP8 253 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 ZNF799Q96GE5 643 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 REEP6Q96HR9 211 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 OR8D2Q9GZM6 311 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 ZNF703Q9H7S9 590 aaPredicted RBP3.31□□□□□ -1.88
ATM-221ENST00000533690 EHFQ9NZC4 300 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 PIGLQ9Y2B2 252 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 A0A0C4DFX4 3053 aa3.31□□□□□ -1.88
ATM-221ENST00000533690 NUMA1Q14980 2115 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 ZNF816-ZNF321PA0A0X1KG74 233 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 CDC14CA4D256 554 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 LRP5LA4QPB2 252 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 NKX2-6A6NCS4 301 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 CCDC85CA6NKD9 419 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 A8MXE2 369 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 TMEM250H0YL14 139 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 H3BQ15 152 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 SLC33A1O00400 549 aaPredicted RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 GEMIN2O14893 280 aaKnown RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 SOX15O60248 233 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 OR2J2O76002 312 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 VENTXO95231 258 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 IGLV1-44P01699 117 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 KLK3P07288 261 aaPredicted RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 ZNF728P0DKX0 622 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 COX5AP20674 150 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 VDAC1P21796 283 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 SFTPDP35247 375 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 DLK1P80370 383 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 SLC9A3R2Q15599 337 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 NSDHLQ15738 373 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 IAH1Q2TAA2 248 aaPredicted RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 PIGYQ3MUY2 71 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 BEX5Q5H9J7 111 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 UNQ6494/PRO21346Q6UXR6 183 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 TBC1D26Q86UD7 250 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 ZNF573Q86YE8 665 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 JAGN1Q8N5M9 183 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 OR10A7Q8NGE5 316 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 OR51G1Q8NGK1 321 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 OR11L1Q8NGX0 322 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 SLC22A8Q8TCC7 542 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 Q8TCH9 128 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 CPNE2Q96FN4 548 aaPredicted RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 FAAP24Q9BTP7 215 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 PHF7Q9BWX1 381 aaPredicted RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 WDR61Q9GZS3 305 aaKnown RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 RIMS4Q9H426 269 aaPredicted RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 SRD5A3Q9H8P0 318 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 RFNGQ9Y644 331 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 TRGV8A0A0C4DH27 118 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 ARGFXA6NJG6 315 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 TMEM210A6NLX4 147 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 STMND1H3BQB6 276 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 CBR3O75828 277 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 PGA5P0DJD9 388 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 AKR1C4P17516 323 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 AMY2BP19961 511 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 FUT3P21217 361 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 VDAC2P45880 294 aaPredicted RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 CLRN1P58418 232 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 HLA-DRB3P79483 266 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 INO80CQ6PI98 192 aaPredicted RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 FIP1L1Q6UN15 594 aaKnown RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 C6orf15Q6UXA7 325 aaPredicted RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 FAM57BQ71RH2 274 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 MOB1BQ7L9L4 216 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 TMEM183AQ8IXX5 376 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 ZBTB34Q8NCN2 500 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 ZNF439Q8NDP4 499 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 OR5A2Q8NGI9 324 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 OR2Y1Q8NGV0 311 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 FNDC9Q8TBE3 224 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 NANPQ8TBE9 248 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 RTN4IP1Q8WWV3 396 aaPredicted RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 SLC25A36Q96CQ1 311 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
ATM-221ENST00000533690 ZNF414Q96IQ9 312 aa3.3□□□□□ -1.88
ATM-221ENST00000533690 CCDC74BQ96LY2 380 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms