RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 CHST5Q9GZS9 411 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 TRIP12Q14669 1992 aaPredicted RBP9.37□□□□□ -0.91
COLCA1-203ENST00000532918 CLDN34H7C241 214 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 ZNF205O95201 554 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 ORM1P02763 201 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 MC5RP33032 325 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 PJVKQ0ZLH3 352 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 SLC16A12Q6ZSM3 486 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 PPP1R32Q7Z5V6 425 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 HARBI1Q96MB7 349 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 RNF122Q9H9V4 155 aa9.37□□□□□ -0.91
COLCA1-203ENST00000532918 A0A0A6YYJ9 748 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 HLA-DRB3P79483 266 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 ECSCRQ19T08 205 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 OR10C1Q96KK4 312 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 SH2D2AQ9NP31 389 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 SPAG17Q6Q759 2223 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 FAM24AA6NFZ4 105 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 K7N7A8 449 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 SYNGR3O43761 229 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 SFT2D2O95562 160 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 CD81P60033 236 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 PKIAP61925 76 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 IL13RA2Q14627 380 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 HLXQ14774 488 aaPredicted RBP9.36□□□□□ -0.91
COLCA1-203ENST00000532918 ZNF429Q86V71 674 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 OR4A4PQ8NGN8 299 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 IL22RA2Q969J5 263 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 OR2V2Q96R30 315 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 PKIBQ9C010 78 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 CACNG5Q9UF02 275 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 TMEFF2Q9UIK5 374 aaPredicted RBP9.36□□□□□ -0.91
COLCA1-203ENST00000532918 IGHV3OR15-7A0A075B7D8 119 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 RAB29O14966 203 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 CTAG2O75638 210 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 ACAA1P09110 424 aaPredicted RBP9.36□□□□□ -0.91
COLCA1-203ENST00000532918 FAM3AP98173 230 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 GUCA2AQ02747 115 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 ATP1A1-AS1Q5TC04 95 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 ZAR1Q86SH2 424 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 NUP37Q8NFH4 326 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 SLC7A10Q9NS82 523 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 DTX4Q9Y2E6 619 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 DLEC1Q9Y238 1755 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 F5H697 171 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 BCL2L11O43521 198 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 DXOO77932 396 aaKnown RBP9.36□□□□□ -0.91
COLCA1-203ENST00000532918 TIAL1Q01085 375 aaKnown RBP eCLIP9.36□□□□□ -0.91
COLCA1-203ENST00000532918 FAAP20Q6NZ36 180 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 OR1L8Q8NGR8 309 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 ABHD17AQ96GS6 310 aa9.36□□□□□ -0.91
COLCA1-203ENST00000532918 A0A1B0GV72 72 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 IGHA1P01876 353 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 SPINK2P20155 84 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 MMP16P51512 607 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 COL10A1Q03692 680 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 FAM27D1Q5T7N8 215 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 DHRS7BQ6IAN0 325 aaPredicted RBP9.35□□□□□ -0.91
COLCA1-203ENST00000532918 SLC26A10Q8NG04 563 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 KIAA1217Q5T5P2 1943 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 MEX3AA1L020 520 aaKnown RBP9.35□□□□□ -0.91
COLCA1-203ENST00000532918 COX5BP10606 129 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 PAX5Q02548 391 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 RIPPLY2Q5TAB7 128 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 RBPMS2Q6ZRY4 209 aaKnown RBP9.35□□□□□ -0.91
COLCA1-203ENST00000532918 TMEM191AQ9H0A3 160 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 KLK11Q9UBX7 282 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 MTFP1Q9UDX5 166 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 MMP24Q9Y5R2 645 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 KNTC1P50748 2209 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 NRXN2Q9P2S2 1712 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 LEUTXA8MZ59 168 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 H3BP45 60 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 FAM87AP0C7U9 286 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 CEACAM21Q3KPI0 293 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 TTC32Q5I0X7 151 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 FAM57AQ8TBR7 257 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 RAXQ9Y2V3 346 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 H3BVH4 76 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 GYPAP02724 150 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 CTSDP07339 412 aaPredicted RBP9.35□□□□□ -0.91
COLCA1-203ENST00000532918 APOBEC3AP31941 199 aaPredicted RBP9.35□□□□□ -0.91
COLCA1-203ENST00000532918 ERVFC1-1P60608 527 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 COL5A1-AS1Q5SY13 56 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 DTD1Q8TEA8 209 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 NEU4Q8WWR8 484 aaPredicted RBP9.35□□□□□ -0.91
COLCA1-203ENST00000532918 MBD3L1Q8WWY6 194 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 WDR13Q9H1Z4 485 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 ANXA10Q9UJ72 324 aa9.35□□□□□ -0.91
COLCA1-203ENST00000532918 MAP1BP46821 2468 aaKnown RBP9.35□□□□□ -0.91
COLCA1-203ENST00000532918 TRIP11Q15643 1979 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 A0A0U1RQV5 110 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 RPL36A-HNRNPH2H7BZ11 118 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 J3QW42 95 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 OGG1O15527 345 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 SYNGR1O43759 233 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 SPCS3P61009 180 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 RPS4XP62701 263 aaKnown RBP9.34□□□□□ -0.91
COLCA1-203ENST00000532918 PSG4Q00888 419 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms