RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 OR5AC2Q9NZP5 309 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 A0A0B4J293 547 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 A0A1B0GU03 582 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A10PA6NDY2 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A18PA6NE21 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A16PA6NEW6 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A20PA6NIJ5 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A8PA6NJQ4 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A7PA6NKC0 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A22PA8MWA6 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A12PA8MX19 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A5PA8MXJ8 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A23PA8MXZ1 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A15PP0C7V4 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A13PP0C7W8 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A14PP0C7W9 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM90A24PP0C7X0 464 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 ZNF528Q3MIS6 628 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 BTNL3Q6UXE8 466 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 OR4S2Q8NH73 311 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 ADTRPQ96IZ2 230 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 SEC11CQ9BY50 192 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 CLDN34H7C241 214 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 FGF2P09038 288 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 HNF1AP20823 631 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 TMEM50BP56557 158 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 IGSF11Q5DX21 431 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 KDF1Q8NAX2 398 aaPredicted RBP13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 ZBTB34Q8NCN2 500 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 Q96M66 194 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 USB1Q9BQ65 265 aaKnown RBP13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 SLC25A22Q9H936 323 aa13.27□□□□□ -0.28
PCDHA3-202ENST00000532566 LOC101059948A0A1B0GTJ6 334 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 TUSC1Q2TAM9 212 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 FAM24BQ8N5W8 94 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 TMEM54Q969K7 222 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 SOSTQ9BQB4 213 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 HES7Q9BYE0 225 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 WNT5BQ9H1J7 359 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 PARP11Q9NR21 331 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 KCNAB3O43448 404 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 F2RP25116 425 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 CD200P41217 278 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 SULT1A1P50225 295 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 SPINK9Q5DT21 86 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 MOGAT3Q86VF5 341 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 R3HDM4Q96D70 268 aa13.27□□□□□ -0.29
PCDHA3-202ENST00000532566 NPIPB7O75200 414 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 MRPL14Q6P1L8 145 aaKnown RBP13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 PRDM14Q9GZV8 571 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 LOC390937A0A1W2PQ73 354 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 MFNGO00587 321 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 COX7A2P2O60397 106 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 MRPS11P82912 194 aaKnown RBP13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 OR10G4Q8NGN3 311 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 OR10G9Q8NGN4 311 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 OR10G7Q8NGN6 311 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 C12orf57Q99622 126 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 RTN4RQ9BZR6 473 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 C5orf66Q9H5L9 145 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 ZNF71Q9NQZ8 489 aaPredicted RBP13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 IL17BQ9UHF5 180 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 CACNA1DQ01668 2161 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 CDC34P49427 236 aaPredicted RBP13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 DTD1Q8TEA8 209 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 PRSS50Q9UI38 385 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 LIPGQ9Y5X9 500 aa13.26□□□□□ -0.29
PCDHA3-202ENST00000532566 SP9P0CG40 484 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 RAB4AP20338 218 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 FAM3AP98173 230 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 UNC119Q13432 240 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 HABP2Q14520 560 aaPredicted RBP13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 ADAMTS17Q8TE56 1095 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 NEIL1Q96FI4 390 aaPredicted RBP13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 LRFN3Q9BTN0 628 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 Q9N2K0 584 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 ZNF737O75373 536 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 GAPDHP04406 335 aaKnown RBP13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 COX5BP10606 129 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 PSG2P11465 335 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 TGIF1Q15583 401 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 RNF212Q495C1 297 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 IMMP1LQ96LU5 166 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 MS4A7Q9GZW8 240 aaPredicted RBP13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 GPR179Q6PRD1 2367 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 OR5H1A6NKK0 313 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 ZNHIT1O43257 154 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 UCP2P55851 309 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 TMEM241Q24JQ0 296 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 OVCH2Q7RTZ1 564 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 MOB3BQ86TA1 216 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 HES4Q9HCC6 221 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 NKX2-8O15522 239 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 YIF1AO95070 293 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 FTH1P19P0C7X4 201 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 RCC1P18754 421 aaPredicted RBP13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 HFEQ30201 348 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 ANKRD55Q3KP44 614 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 AWAT1Q58HT5 328 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms