RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 SLC36A1Q7Z2H8 476 aa12.88□□□□□ -0.35
CTSB-219ENST00000530640 TRAPPC6BQ86SZ2 158 aa12.88□□□□□ -0.35
CTSB-219ENST00000530640 BORCS5Q969J3 196 aa12.88□□□□□ -0.35
CTSB-219ENST00000530640 COQ2Q96H96 371 aa12.88□□□□□ -0.35
CTSB-219ENST00000530640 CMSS1Q9BQ75 279 aaKnown RBP12.88□□□□□ -0.35
CTSB-219ENST00000530640 ETAA1Q9NY74 926 aa12.88□□□□□ -0.35
CTSB-219ENST00000530640 MTFP1Q9UDX5 166 aa12.88□□□□□ -0.35
CTSB-219ENST00000530640 TRBV6-6A0A0A6YYG2 114 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 TMEM89A2RUT3 159 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 POM121CA8CG34 1229 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 F5H0A9 414 aaPredicted RBP12.87□□□□□ -0.35
CTSB-219ENST00000530640 MGST3O14880 152 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 ADAM20O43506 726 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 LANCL1O43813 399 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 UPK1BO75841 260 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 VENTXO95231 258 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 FCGR3AP08637 254 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 LCN2P80188 198 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 GRK1Q15835 563 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 RNASE12Q5GAN4 147 aaKnown RBP12.87□□□□□ -0.35
CTSB-219ENST00000530640 PPP1R35Q8TAP8 253 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 MRPL30Q8TCC3 161 aaKnown RBP12.87□□□□□ -0.35
CTSB-219ENST00000530640 NEK7Q8TDX7 302 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 FCAMRQ8WWV6 532 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 MED30Q96HR3 178 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 OCSTAMPQ9BR26 566 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 PALMDQ9NP74 551 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 KLK11Q9UBX7 282 aa12.87□□□□□ -0.35
CTSB-219ENST00000530640 LOC105371242A0A075B767 164 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 J3QLI3 93 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 FOXH1O75593 365 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 GATA3P23771 443 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 ERP29P30040 261 aaKnown RBP12.86□□□□□ -0.35
CTSB-219ENST00000530640 RCVRNP35243 200 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 GDNFP39905 211 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 CBX5P45973 191 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 HILS1P60008 231 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 ACTBP60709 375 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 ACTG1P63261 375 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 IFITM3Q01628 133 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 SLC35E4Q6ICL7 350 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 ZNF880Q6PDB4 577 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 C3orf56Q8N813 242 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 TMEM185AQ8NFB2 350 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 THAP7Q9BT49 309 aaPredicted RBP12.86□□□□□ -0.35
CTSB-219ENST00000530640 TMPRSS13Q9BYE2 586 aa12.86□□□□□ -0.35
CTSB-219ENST00000530640 RIMS4Q9H426 269 aaPredicted RBP12.86□□□□□ -0.35
CTSB-219ENST00000530640 ZNF107Q9UII5 783 aaPredicted RBP12.86□□□□□ -0.35
CTSB-219ENST00000530640 A0A1W2PQ09 198 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 TMEM30CPA0ZSE6 113 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 MEIS3P1A6NDR6 274 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 ORC5O43913 435 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 RPS2P15880 293 aaKnown RBP12.85□□□□□ -0.35
CTSB-219ENST00000530640 NAT1P18440 290 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 P2RX3P56373 397 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 SRSF7Q16629 238 aaKnown RBP eCLIP12.85□□□□□ -0.35
CTSB-219ENST00000530640 ZNF841Q6ZN19 808 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 Q6ZS49 121 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 FGFRL1Q8N441 504 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 GVQW1Q8N7I0 195 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 OR5D13Q8NGL4 314 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 SNAPC3Q92966 411 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 NCOR1P1Q9H4R4 102 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 PATZ1Q9HBE1 687 aaKnown RBP12.85□□□□□ -0.35
CTSB-219ENST00000530640 MBNL3Q9NUK0 354 aaKnown RBP12.85□□□□□ -0.35
CTSB-219ENST00000530640 SLC25A10Q9UBX3 287 aaPredicted RBP12.85□□□□□ -0.35
CTSB-219ENST00000530640 MIOXQ9UGB7 285 aa12.85□□□□□ -0.35
CTSB-219ENST00000530640 DVL1O14640 695 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 AVPP01185 164 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 MT-ND4P03905 459 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 MRPS15P82914 257 aaKnown RBP12.84□□□□□ -0.35
CTSB-219ENST00000530640 AESQ08117 197 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 KLF9Q13886 244 aaPredicted RBP12.84□□□□□ -0.35
CTSB-219ENST00000530640 EDDM3AQ14507 147 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 LRRC10Q5BKY1 277 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 KRBOX4Q5JUW0 171 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 TRIQKQ629K1 86 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 STEAP3Q658P3 488 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 C1orf229Q6ZS94 237 aaPredicted RBP12.84□□□□□ -0.35
CTSB-219ENST00000530640 MOB1BQ7L9L4 216 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 HOGA1Q86XE5 327 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 SUCNR1Q9BXA5 334 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 ZNF230Q9UIE0 474 aaPredicted RBP12.84□□□□□ -0.35
CTSB-219ENST00000530640 KIF25Q9UIL4 384 aa12.84□□□□□ -0.35
CTSB-219ENST00000530640 IGKV1D-8A0A087WSZ0 117 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 ANKRD20A5PA0PJZ0 165 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 ODAMA1E959 279 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 NDUFB3O43676 98 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 RBBP9O75884 186 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 WNT2P09544 360 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 EPHA1P21709 976 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 ZFP36P26651 326 aaKnown RBP12.83□□□□□ -0.36
CTSB-219ENST00000530640 GLIPR1P48060 266 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 SEC61A1P61619 476 aaKnown RBP12.83□□□□□ -0.36
CTSB-219ENST00000530640 DCTN2Q13561 401 aaKnown RBP12.83□□□□□ -0.36
CTSB-219ENST00000530640 ESCO2Q56NI9 601 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 GDPD3Q7L5L3 318 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 NLRC3Q7RTR2 1065 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 TCF23Q7RTU1 214 aa12.83□□□□□ -0.36
CTSB-219ENST00000530640 LYSMD2Q8IV50 215 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms