RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 CCKARP32238 428 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 MDH2P40926 338 aaKnown RBP12.6□□□□□ -0.39
CAPN1-214ENST00000528165 FUT6P51993 359 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 NUBP1P53384 320 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 BATF2Q8N1L9 274 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 RAB40CQ96S21 281 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 PCGF1Q9BSM1 259 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 PSMG3Q9BT73 122 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-214ENST00000528165 MAP1LC3BQ9GZQ8 125 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 CCL28Q9NRJ3 127 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 FGF21Q9NSA1 209 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 TRANK1O15050 2925 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 SLC22A20A6NK97 555 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 ZNF737O75373 536 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 CNOT4O95628 575 aaKnown RBP12.59□□□□□ -0.39
CAPN1-214ENST00000528165 METTL15P1P0C7V9 234 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 CRYGSP22914 178 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 RAB35Q15286 201 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 C17orf82Q86X59 251 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-214ENST00000528165 EXTL1Q92935 676 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 IL22RA2Q969J5 263 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 AGMATQ9BSE5 352 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 CBLN4Q9NTU7 201 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 CNTRLQ7Z7A1 2325 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 IGHV3-15A0A0B4J1V0 119 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 IGKV1D-13A0A0B4J2D9 117 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 A0A1W2PPQ1 181 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 H0Y980 276 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 IGKV1-13P0DP09 117 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 FGF5P12034 268 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 FKBP2P26885 142 aaKnown RBP12.59□□□□□ -0.39
CAPN1-214ENST00000528165 CLEC12BQ2HXU8 276 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 PLCXD3Q63HM9 321 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 PLXDC1Q8IUK5 500 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 PLK3Q9H4B4 646 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 FUT9Q9Y231 359 aa12.59□□□□□ -0.39
CAPN1-214ENST00000528165 SCTP09683 121 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 ERVFC1-1P60608 527 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 SERF2P84101 59 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 RELQ04864 619 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-214ENST00000528165 ACOT6Q3I5F7 207 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-214ENST00000528165 FAM27BQ5VT28 67 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 TMEM42Q69YG0 159 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 RPUSD4Q96CM3 377 aaKnown RBP12.58□□□□□ -0.4
CAPN1-214ENST00000528165 KBTBD11O94819 623 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 HRASP01112 189 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF25P17030 456 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-214ENST00000528165 RAB4AP20338 218 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 ACSF3Q4G176 576 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-214ENST00000528165 TMEM41BQ5BJD5 291 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF774Q6NX45 483 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 GPR137CQ8N3F9 429 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 MYOTQ9UBF9 498 aa12.58□□□□□ -0.4
CAPN1-214ENST00000528165 SCGB1D1O95968 90 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 HOXA6P31267 233 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 ELLP55199 621 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-214ENST00000528165 RPL23P62829 140 aaKnown RBP12.57□□□□□ -0.4
CAPN1-214ENST00000528165 MEF2BQ02080 365 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-214ENST00000528165 SHHQ15465 462 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 TEX38Q6PEX7 206 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 DEFB119Q8N690 84 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 RLN3Q8WXF3 142 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 PIGCQ92535 297 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 LHX4Q969G2 390 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF837Q96EG3 531 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-214ENST00000528165 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 ELOVL1Q9BW60 279 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 IGHV1OR21-1A0A087WYE8 117 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 A0A0G2JRQ6 117 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 LRRC3CA6NJW4 275 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 B4E171 279 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 SYNGR3O43761 229 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 SFTPCP11686 197 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 S100GP29377 79 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 TSPAN7P41732 249 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 LBX1P52954 281 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 CFHR1Q03591 330 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 Q6ZS49 121 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF295-AS1Q8N0V1 137 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 OR1F12Q8NHA8 337 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 PINX1Q96BK5 328 aaKnown RBP12.57□□□□□ -0.4
CAPN1-214ENST00000528165 GPR146Q96CH1 333 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF501Q96CX3 271 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-214ENST00000528165 OR51I2Q9H344 312 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 SLC39A9Q9NUM3 307 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 CD207Q9UJ71 328 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 REV3LO60673 3130 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 UNC13CQ8NB66 2214 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 PGLYRP1O75594 196 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-214ENST00000528165 IGLV3-19P01714 112 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 SERPINE2P07093 398 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 ACTL10Q5JWF8 245 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 PRAMEF20Q5VT98 475 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 CARFQ8N187 725 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF525Q8N782 197 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF611Q8N823 705 aa12.57□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF845Q96IR2 970 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-214ENST00000528165 THOC3Q96J01 351 aaKnown RBP12.57□□□□□ -0.4
CAPN1-214ENST00000528165 ASXL3Q9C0F0 2248 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 DUX1O43812 170 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms