RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 C2orf68Q2NKX9 166 aa16.57■□□□□ 0.24
VPS28-206ENST00000526734 GLT8D1Q68CQ7 371 aa16.57■□□□□ 0.24
VPS28-206ENST00000526734 ZNF497Q6ZNH5 498 aa16.57■□□□□ 0.24
VPS28-206ENST00000526734 TMEM219Q86XT9 240 aa16.57■□□□□ 0.24
VPS28-206ENST00000526734 OR52M1Q8NGK5 317 aa16.57■□□□□ 0.24
VPS28-206ENST00000526734 TMED9Q9BVK6 235 aa16.57■□□□□ 0.24
VPS28-206ENST00000526734 LY6LH3BQJ8 138 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 J3QR06 171 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 AIPO00170 330 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 SC5DO75845 299 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 CRHBPP24387 322 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 SSTR5P35346 364 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 TPBGQ13641 420 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 Q3ZCU0 254 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 HSD17B12Q53GQ0 312 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 RBM48Q5RL73 367 aaKnown RBP16.56■□□□□ 0.24
VPS28-206ENST00000526734 TRAT1Q6PIZ9 186 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 PRSS48Q7RTY5 328 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 KLHDC1Q8N7A1 406 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 TOMM40LQ969M1 308 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 RPEQ96AT9 228 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 ZNF581Q9P0T4 197 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 SIGLEC9Q9Y336 463 aa16.56■□□□□ 0.24
VPS28-206ENST00000526734 CRTAPO75718 401 aaPredicted RBP16.55■□□□□ 0.24
VPS28-206ENST00000526734 UCHL1P09936 223 aa16.55■□□□□ 0.24
VPS28-206ENST00000526734 MADCAM1Q13477 382 aa16.55■□□□□ 0.24
VPS28-206ENST00000526734 C1orf100Q5SVJ3 147 aa16.55■□□□□ 0.24
VPS28-206ENST00000526734 C6orf183Q5T699 404 aa16.55■□□□□ 0.24
VPS28-206ENST00000526734 RAB12Q6IQ22 244 aa16.55■□□□□ 0.24
VPS28-206ENST00000526734 CFHR4Q92496 578 aa16.55■□□□□ 0.24
VPS28-206ENST00000526734 Q96M66 194 aa16.55■□□□□ 0.24
VPS28-206ENST00000526734 SELENOIQ9C0D9 397 aa16.55■□□□□ 0.24
VPS28-206ENST00000526734 ETAA1Q9NY74 926 aa16.55■□□□□ 0.24
VPS28-206ENST00000526734 PSG11Q9UQ72 335 aa16.55■□□□□ 0.24
VPS28-206ENST00000526734 M0QZK8 103 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 MT-ND4P03905 459 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 FUT3P21217 361 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 RANBP1P43487 201 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 RAB7AP51149 207 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 MLLT11Q13015 90 aaPredicted RBP16.54■□□□□ 0.24
VPS28-206ENST00000526734 CEACAM19Q7Z692 300 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 LRRTM1Q86UE6 522 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 OR8H3Q8N146 312 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 GAPTQ8N292 157 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 C8orf31Q8N9H6 132 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 RFESDQ8TAC1 157 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 SGCDQ92629 289 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 ARL11Q969Q4 196 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 SERTAD4Q9NUC0 356 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 RAB26Q9ULW5 256 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 KIAA2026Q5HYC2 2103 aa16.54■□□□□ 0.24
VPS28-206ENST00000526734 C15orf65H3BRN8 121 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 ARL6IP5O75915 188 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 OR2F2O95006 317 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 JUNBP17275 347 aaPredicted RBP16.53■□□□□ 0.24
VPS28-206ENST00000526734 SRMP19623 302 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 ARSJQ5FYB0 599 aaPredicted RBP16.53■□□□□ 0.24
VPS28-206ENST00000526734 LIPKQ5VXJ0 399 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 ZNF554Q86TJ5 538 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 THNSL2Q86YJ6 484 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 TMEM104Q8NE00 496 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 CCDC90BQ9GZT6 254 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 BANF2Q9H503 90 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 TRAPPC2LQ9UL33 140 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 PEX16Q9Y5Y5 336 aa16.53■□□□□ 0.24
VPS28-206ENST00000526734 SPINT2O43291 252 aa16.52■□□□□ 0.24
VPS28-206ENST00000526734 PDCD6O75340 191 aa16.52■□□□□ 0.24
VPS28-206ENST00000526734 PEX14O75381 377 aa16.52■□□□□ 0.24
VPS28-206ENST00000526734 FAM106CPP0CH98 169 aa16.52■□□□□ 0.24
VPS28-206ENST00000526734 CD37P11049 281 aa16.52■□□□□ 0.24
VPS28-206ENST00000526734 GP2P55259 537 aaKnown RBP16.52■□□□□ 0.24
VPS28-206ENST00000526734 INSL4Q14641 139 aa16.52■□□□□ 0.24
VPS28-206ENST00000526734 TBCEQ15813 527 aaPredicted RBP16.52■□□□□ 0.24
VPS28-206ENST00000526734 LTC4SQ16873 150 aa16.52■□□□□ 0.24
VPS28-206ENST00000526734 FAM27D1Q5T7N8 215 aa16.52■□□□□ 0.24
VPS28-206ENST00000526734 OR10X1Q8NGY0 326 aa16.52■□□□□ 0.24
VPS28-206ENST00000526734 RBM14Q96PK6 669 aaKnown RBP16.52■□□□□ 0.24
VPS28-206ENST00000526734 SLC25A33Q9BSK2 321 aa16.52■□□□□ 0.24
VPS28-206ENST00000526734 TRAV39A0A0B4J263 110 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 SDCBPO00560 298 aaPredicted RBP16.51■□□□□ 0.23
VPS28-206ENST00000526734 CSF1P09603 554 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 HSMCR30P0CW71 290 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 VSIG10L2P0DP72 767 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 CPEP16870 476 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 IL3RAP26951 378 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 VDAC2P45880 294 aaPredicted RBP16.51■□□□□ 0.23
VPS28-206ENST00000526734 GNG10P50151 68 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 LINC00311Q8N616 119 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 OR6M1Q8NGM8 313 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 KCNG3Q8TAE7 436 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 CNBD2Q96M20 576 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 WNT10AQ9GZT5 417 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 GFOD1Q9NXC2 390 aa16.51■□□□□ 0.23
VPS28-206ENST00000526734 FAM90A9PA6NNJ1 464 aa16.5■□□□□ 0.23
VPS28-206ENST00000526734 SLC22A1O15245 554 aa16.5■□□□□ 0.23
VPS28-206ENST00000526734 ATP6V1G2O95670 118 aa16.5■□□□□ 0.23
VPS28-206ENST00000526734 MPIG6BO95866 241 aa16.5■□□□□ 0.23
VPS28-206ENST00000526734 HTR2CP28335 458 aa16.5■□□□□ 0.23
VPS28-206ENST00000526734 VHLP40337 213 aa16.5■□□□□ 0.23
VPS28-206ENST00000526734 UTF1Q5T230 341 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms