RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 SPINK14Q6IE38 97 aa9.96□□□□□ -0.81
LINC01001-201ENST00000526704 C20orf204Q6ZNR8 217 aa9.96□□□□□ -0.81
LINC01001-201ENST00000526704 TMEM217Q8N7C4 229 aa9.96□□□□□ -0.81
LINC01001-201ENST00000526704 MRPL30Q8TCC3 161 aaKnown RBP9.96□□□□□ -0.81
LINC01001-201ENST00000526704 ZNF552Q9H707 407 aaPredicted RBP9.96□□□□□ -0.81
LINC01001-201ENST00000526704 KIAA1456Q9P272 454 aa9.96□□□□□ -0.81
LINC01001-201ENST00000526704 RNF115Q9Y4L5 304 aa9.96□□□□□ -0.81
LINC01001-201ENST00000526704 A0A0G2JRQ6 117 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 BTBD17A6NE02 478 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 TRAPPC2LH3BP13 241 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 HSPA12AO43301 675 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 SLC34A2O95436 690 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 CER1O95813 267 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 MMP9P14780 707 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 PAX9P55771 341 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 CLDN18P56856 261 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 ADAM5Q6NVV9 412 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 PCSK4Q6UW60 755 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 TUSC5Q8IXB3 177 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 IL22RA1Q8N6P7 574 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 APOBEC3DQ96AK3 386 aaPredicted RBP9.96□□□□□ -0.82
LINC01001-201ENST00000526704 IER2Q9BTL4 223 aa9.96□□□□□ -0.82
LINC01001-201ENST00000526704 ZNF703Q9H7S9 590 aaPredicted RBP9.96□□□□□ -0.82
LINC01001-201ENST00000526704 BOKQ9UMX3 212 aaPredicted RBP9.96□□□□□ -0.82
LINC01001-201ENST00000526704 CHST1O43916 411 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 OR2C1O95371 312 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 NGFP01138 241 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
LINC01001-201ENST00000526704 FBP1P09467 338 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 SPINK2P20155 84 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 OR2B8PP59922 312 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 ICAM4Q14773 271 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 HAGHQ16775 308 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 DCAF12Q5T6F0 453 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 MKXQ8IYA7 352 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 ZNF295-AS1Q8N0V1 137 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 IL22RA2Q969J5 263 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 ZNF488Q96MN9 340 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 CALHM2Q9HA72 323 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 LRFN1Q9P244 771 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 LIPGQ9Y5X9 500 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 CHD3Q12873 2000 aaKnown RBP9.95□□□□□ -0.82
LINC01001-201ENST00000526704 TMEM265A0A087WTH1 108 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 TRBV23-1A0A0A0MS06 115 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 C3orf80F5H4A9 247 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 PGLYRP1O75594 196 aaPredicted RBP9.95□□□□□ -0.82
LINC01001-201ENST00000526704 PDGFBP01127 241 aaPredicted RBP9.95□□□□□ -0.82
LINC01001-201ENST00000526704 CTXN2P0C2S0 81 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 COX5BP10606 129 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 CEACAM1P13688 526 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 SSPNQ14714 243 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 RNPS1Q15287 305 aaKnown RBP9.95□□□□□ -0.82
LINC01001-201ENST00000526704 SNIP1Q8TAD8 396 aaKnown RBP9.95□□□□□ -0.82
LINC01001-201ENST00000526704 GNPNAT1Q96EK6 184 aaPredicted RBP9.95□□□□□ -0.82
LINC01001-201ENST00000526704 ATP5SQ99766 215 aa9.95□□□□□ -0.82
LINC01001-201ENST00000526704 H3BQ15 152 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 LILRA1O75019 489 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 SCAF4O95104 1147 aaKnown RBP9.94□□□□□ -0.82
LINC01001-201ENST00000526704 NQO2P16083 231 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 ZNF324BQ6AW86 544 aaPredicted RBP9.94□□□□□ -0.82
LINC01001-201ENST00000526704 C6orf15Q6UXA7 325 aaPredicted RBP9.94□□□□□ -0.82
LINC01001-201ENST00000526704 HEPN1Q6WQI6 88 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 C1QL4Q86Z23 238 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 CMTM1Q8IZ96 169 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 OR2M7Q8NG81 312 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 RAB39BQ96DA2 213 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 MUCL1Q96DR8 90 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 HES7Q9BYE0 225 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 TRBV6-6A0A0A6YYG2 114 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 TRAV24A0A0B4J272 114 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 H0YL77 283 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 NEURL1O76050 574 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 F2RP25116 425 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 IL24Q13007 206 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 ZNF506Q5JVG8 444 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 ZNF880Q6PDB4 577 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 OR5A2Q8NGI9 324 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 OR5P3Q8WZ94 311 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 GTF3AQ92664 365 aaKnown RBP9.94□□□□□ -0.82
LINC01001-201ENST00000526704 THOC3Q96J01 351 aaKnown RBP9.94□□□□□ -0.82
LINC01001-201ENST00000526704 POM121L2Q96KW2 1035 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 LOXL2Q9Y4K0 774 aa9.94□□□□□ -0.82
LINC01001-201ENST00000526704 ZNF729A6NN14 1252 aaPredicted RBP9.93□□□□□ -0.82
LINC01001-201ENST00000526704 AP4M1O00189 453 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 CLN5O75503 358 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 HLA-DRB3P79483 266 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 OR8G1Q15617 311 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 AKR1C8PQ5T2L2 129 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 LINC00596Q86U02 117 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 H1FOOQ8IZA3 346 aaPredicted RBP9.93□□□□□ -0.82
LINC01001-201ENST00000526704 CYB561D1Q8N8Q1 229 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 CLDND2Q8NHS1 167 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 GPR146Q96CH1 333 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 FAM173AQ9BQD7 235 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 CD300LBA8K4G0 201 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 ZNF727A8MUV8 499 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 KIAA1324LA8MWY0 1029 aaPredicted RBP9.93□□□□□ -0.82
LINC01001-201ENST00000526704 CEBPGP53567 150 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 TAS2R30P59541 319 aa9.93□□□□□ -0.82
LINC01001-201ENST00000526704 Q3ZCU0 254 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms