RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CCDC124Q96CT7 223 aaKnown RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 ZHX1-C8orf76Q96EF9 292 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 PGLYRP4Q96LB8 373 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 LINC00167Q96N53 147 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 TMEM43Q9BTV4 400 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 SLC19A3Q9BZV2 496 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 OR51V1Q9H2C8 321 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 ELOVL3Q9HB03 270 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 RHBDL2Q9NX52 303 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 TAS2R1Q9NYW7 299 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 PRPF19Q9UMS4 504 aaKnown RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 ERGIC3Q9Y282 383 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 TRAPPC4Q9Y296 219 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 SAMHD1Q9Y3Z3 626 aaKnown RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 ENPP4Q9Y6X5 453 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 ESPL1Q14674 2120 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 ZNF462Q96JM2 2506 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 PIEZO2Q9H5I5 2752 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 MAST4O15021 2626 aa2.65□□□□□ -1.98
CD44-219ENST00000525685 GTF3C1Q12789 2109 aa2.65□□□□□ -1.98
CD44-219ENST00000525685 A0A1B0GVG6 124 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 FUOMA2VDF0 154 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 H0YJX3 145 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 GPR171O14626 319 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 GYG2O15488 501 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 RS1O15537 224 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 DENRO43583 198 aaKnown RBP2.65□□□□□ -1.99
CD44-219ENST00000525685 TRAF3IP2O43734 574 aaPredicted RBP2.65□□□□□ -1.99
CD44-219ENST00000525685 OR2T1O43869 369 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 PRKYO43930 277 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 UPK3AO75631 287 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 OR7A10O76100 309 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 IGF2P01344 180 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 FABP3P05413 133 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 CRYGCP07315 174 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 ASAH2BP0C7U1 165 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 RAB4AP20338 218 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 COX5AP20674 150 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 COX7A1P24310 79 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 FGF9P31371 208 aaPredicted RBP2.65□□□□□ -1.99
CD44-219ENST00000525685 UGT2B10P36537 528 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 CD79BP40259 229 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 RBM34P42696 430 aaKnown RBP2.65□□□□□ -1.99
CD44-219ENST00000525685 MAGEA2P43356 314 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 PRKXP51817 358 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 ZNF133P52736 654 aaPredicted RBP2.65□□□□□ -1.99
CD44-219ENST00000525685 PMS2P3Q13401 168 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 SNTB2Q13425 540 aaKnown RBP2.65□□□□□ -1.99
CD44-219ENST00000525685 TRAM2Q15035 370 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 EXOC3L2Q2M3D2 409 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 ZNF829Q3KNS6 432 aaPredicted RBP2.65□□□□□ -1.99
CD44-219ENST00000525685 TSPO2Q5TGU0 170 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 CASP12Q6UXS9 341 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 IDO2Q6ZQW0 420 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 ACOT7LQ6ZUV0 252 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 AAED1Q7RTV5 226 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 MOB3BQ86TA1 216 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 CYP4Z1Q86W10 505 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 DHFR2Q86XF0 187 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 WDFY1Q8IWB7 410 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 ZNF679Q8IYX0 411 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 GABRG1Q8N1C3 465 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 OR9K2Q8NGE7 335 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 OR52I1Q8NGK6 324 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 OR5J2Q8NH18 312 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 LINC01560Q8TB33 94 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 TMEM239Q8WW34 195 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 CAPSLQ8WWF8 208 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 ACOT11Q8WXI4 607 aaPredicted RBP2.65□□□□□ -1.99
CD44-219ENST00000525685 APH1AQ96BI3 265 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 ASB9Q96DX5 294 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 SGTBQ96EQ0 304 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 PYURFQ96I23 114 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 THTPAQ9BU02 230 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 ALG12Q9BV10 488 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 RNF126Q9BV68 326 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 SLC17A5Q9NRA2 495 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 SMPD3Q9NY59 655 aaPredicted RBP2.65□□□□□ -1.99
CD44-219ENST00000525685 ZNF229Q9UJW7 825 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 RPH3ALQ9UNE2 315 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 COPS3Q9UNS2 423 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 RASD1Q9Y272 281 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 MED31Q9Y3C7 131 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 MED12Q93074 2177 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 DNAJC13O75165 2243 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 MED12LQ86YW9 2145 aa2.65□□□□□ -1.99
CD44-219ENST00000525685 KALRNO60229 2985 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 CFAP46Q8IYW2 2715 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 NAV2Q8IVL1 2488 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 UBR5O95071 2799 aaPredicted RBP2.64□□□□□ -1.99
CD44-219ENST00000525685 SVILO95425 2214 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 TRAV27A0A087WT01 109 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 A0A087WUU8 490 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 DHRS12A0PJE2 317 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 EFCAB10A6NFE3 127 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 DEFB108AA8MXU0 73 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 PLPP3O14495 311 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 CDC42EP2O14613 210 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 CLOCKO15516 846 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 OR10H3O60404 316 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms