RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ADAT1Q9BUB4 502 aaKnown RBP2.4□□□□□ -2.03
CSDE1-208ENST00000524652 TMED9Q9BVK6 235 aa2.4□□□□□ -2.03
CSDE1-208ENST00000524652 YTHDF1Q9BYJ9 559 aaKnown RBP2.4□□□□□ -2.03
CSDE1-208ENST00000524652 CHST5Q9GZS9 411 aa2.4□□□□□ -2.03
CSDE1-208ENST00000524652 OR51E2Q9H255 320 aa2.4□□□□□ -2.03
CSDE1-208ENST00000524652 KCNK15Q9H427 330 aa2.4□□□□□ -2.03
CSDE1-208ENST00000524652 Q9H521 79 aa2.4□□□□□ -2.03
CSDE1-208ENST00000524652 RANGRFQ9HD47 186 aaPredicted RBP2.4□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF275Q9NSD4 429 aaPredicted RBP2.4□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF701Q9NV72 531 aaPredicted RBP2.4□□□□□ -2.03
CSDE1-208ENST00000524652 NDUFB11Q9NX14 153 aa2.4□□□□□ -2.03
CSDE1-208ENST00000524652 TAS2R4Q9NYW5 299 aa2.4□□□□□ -2.03
CSDE1-208ENST00000524652 MRPL15Q9P015 296 aaKnown RBP2.4□□□□□ -2.03
CSDE1-208ENST00000524652 RCC2Q9P258 522 aaKnown RBP2.4□□□□□ -2.03
CSDE1-208ENST00000524652 EIF3KQ9UBQ5 218 aaKnown RBP2.4□□□□□ -2.03
CSDE1-208ENST00000524652 DUX4Q9UBX2 424 aa2.4□□□□□ -2.03
CSDE1-208ENST00000524652 ERGIC3Q9Y282 383 aa2.4□□□□□ -2.03
CSDE1-208ENST00000524652 IGLV7-46A0A075B6I9 117 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 IGHV4-4A0A075B6R2 117 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 IGHV4-30-2A0A087WSY4 118 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 A0A087WXM4 84 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 IGHV4-61A0A0C4DH41 118 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 TEX13DA0A0J9YY54 714 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF816-ZNF321PA0A0X1KG74 233 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 A0A1B0GVI7 797 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 PQLC2LA1A4F0 135 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 SMIM30A4D0T7 59 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 GGT3PA6NGU5 568 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM212A6NML5 194 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 DHRS7CA6NNS2 312 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF879B4DU55 563 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF732B4DXR9 585 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-208ENST00000524652 CCRL2O00421 344 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 CDIPTO14735 213 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 AKR7A2O43488 359 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 SPRY1O43609 319 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-208ENST00000524652 SYNGR1O43759 233 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 SSX4O60224 188 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 MRPS14O60783 128 aaKnown RBP2.39□□□□□ -2.03
CSDE1-208ENST00000524652 GPX5O75715 221 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 PTBP3O95758 552 aaKnown RBP2.39□□□□□ -2.03
CSDE1-208ENST00000524652 NRASP01111 189 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 LHBP01229 141 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 IGHV4-59P01825 116 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 APOC1P02654 83 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 MAS1P04201 325 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 TACSTD2P09758 323 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 UCHL1P09936 223 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 OCM2P0CE71 109 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 HSMCR30P0CW71 290 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 CALCBP10092 127 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 GADD45AP24522 165 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 AZGP1P25311 298 aaKnown RBP2.39□□□□□ -2.03
CSDE1-208ENST00000524652 PSMB9P28065 219 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 GABRA5P31644 462 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 IL2RGP31785 369 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 CD80P33681 288 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 DDOSTP39656 456 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 CD200P41217 278 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 NPBWR2P48146 333 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 ALDH3B2P48448 385 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 GPM6AP51674 278 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 CAV3P56539 151 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 SNRPD2P62316 118 aaKnown RBP2.39□□□□□ -2.03
CSDE1-208ENST00000524652 TNFAIP6P98066 277 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-208ENST00000524652 RIPPLY1Q0D2K3 151 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 PLA2G7Q13093 441 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 CEACAM21Q3KPI0 293 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 Q499Y3 187 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 ACSM3Q53FZ2 586 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 ARMCX4Q5H9R4 360 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 CLVS2Q5SYC1 327 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 AVPI1Q5T686 147 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM244Q5VVB8 128 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 CD200R1LQ6Q8B3 271 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 METAP1DQ6UB28 335 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-208ENST00000524652 WDR82Q6UXN9 313 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 TMPRSS11AQ6ZMR5 421 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 BIVMQ86UB2 503 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 LRRTM1Q86UE6 522 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 CCDC190Q86UF4 302 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 RTN4RL2Q86UN3 420 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 COMMD2Q86X83 199 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 ANGPTL5Q86XS5 388 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 EGFL6Q8IUX8 553 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 C1orf174Q8IYL3 243 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 FGFRL1Q8N441 504 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 WFDC11Q8NEX6 87 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 TSPAN14Q8NG11 270 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 OR1M1Q8NGA1 313 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 OR13F1Q8NGS4 319 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 OR13C3Q8NGS6 347 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 OR13C9Q8NGT0 318 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 TRMT10AQ8TBZ6 339 aaKnown RBP2.39□□□□□ -2.03
CSDE1-208ENST00000524652 TSEN15Q8WW01 171 aaKnown RBP2.39□□□□□ -2.03
CSDE1-208ENST00000524652 OR5P3Q8WZ94 311 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 UFD1Q92890 307 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM106AQ96A25 262 aa2.39□□□□□ -2.03
CSDE1-208ENST00000524652 YIPF6Q96EC8 236 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms