RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 LYRM2Q9NU23 88 aaPredicted RBP6.86□□□□□ -1.31
TNFRSF10B-208ENST00000523752 MTCH1Q9NZJ7 389 aa6.86□□□□□ -1.31
TNFRSF10B-208ENST00000523752 TMEM56-RWDD3S4R434 201 aa6.86□□□□□ -1.31
TNFRSF10B-208ENST00000523752 SYNGR1O43759 233 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 CDS2O95674 445 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 NAPSAO96009 420 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 NGFP01138 241 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 RAB5CP51148 216 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 PRDX4Q13162 271 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 RHEBQ15382 184 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 SOHLH1Q5JUK2 328 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ZNF295-AS1Q8N0V1 137 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ZNF552Q9H707 407 aaPredicted RBP6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 NIT2Q9NQR4 276 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 MED12LQ86YW9 2145 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 C5orf49A4QMS7 147 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 RBFOX3A6NFN3 312 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 NTN3O00634 580 aaPredicted RBP6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 DNPH1O43598 174 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 FABP1P07148 127 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 SMIM6P0DI80 62 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ZFP36L1Q07352 338 aaKnown RBP6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 AKR1C8PQ5T2L2 129 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 SPINK14Q6IE38 97 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 KCNE4Q8WWG9 221 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 TAAR3PQ9P1P4 343 aa6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 METTL1Q9UBP6 276 aaKnown RBP6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 CHD3Q12873 2000 aaKnown RBP6.85□□□□□ -1.31
TNFRSF10B-208ENST00000523752 H3BQ15 152 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 OR2C1O95371 312 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 SERPINE2P07093 398 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 PAX9P55771 341 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 GFRA1P56159 465 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 RAB2AP61019 212 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ARF1P84077 181 aaKnown RBP6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 PLP2Q04941 152 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 RIPPLY2Q5TAB7 128 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 COLCA1Q6ZS62 124 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 BEND4Q6ZU67 534 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 C17orf78Q8N4C9 275 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 CYB561D1Q8N8Q1 229 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 RAB39BQ96DA2 213 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 HES7Q9BYE0 225 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 C12orf49Q9H741 205 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ZNF391Q9UJN7 358 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 TRAV39A0A0B4J263 110 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ARGFXA6NJG6 315 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 TRAPPC2LH3BP13 241 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ST8SIA5O15466 376 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 PPIHO43447 177 aaKnown RBP6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 CHST1O43916 411 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 CYTIPO60759 359 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 PDGFBP01127 241 aaPredicted RBP6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 RAC2P15153 192 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 TUBG1P23258 451 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 PMELP40967 661 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 S100A12P80511 92 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 FOXO1Q12778 655 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ZNF266Q14584 549 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ICAM4Q14773 271 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 PDZD11Q5EBL8 140 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ACER2Q5QJU3 275 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 SP5Q6BEB4 398 aaPredicted RBP6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 HEPN1Q6WQI6 88 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 KDF1Q8NAX2 398 aaPredicted RBP6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 HLA-CQ95604 372 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 REPIN1Q9BWE0 567 aaKnown RBP6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 PRDM14Q9GZV8 571 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 PLEKHF2Q9H8W4 249 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 PLSCR2Q9NRY7 297 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 RNF115Q9Y4L5 304 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 DOCK11Q5JSL3 2073 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 TNRC6AQ8NDV7 1962 aaKnown RBP6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 IFITM10A6NMD0 228 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ZNF732B4DXR9 585 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 TUSC2O75896 110 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 YIF1AO95070 293 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 SYNGR4O95473 234 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 CXCL1P09341 107 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 FGF12P61328 243 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 PCBD1P61457 104 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 TMEM267Q0VDI3 215 aaPredicted RBP6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 ZNF674Q2M3X9 581 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 HIKESHIQ53FT3 197 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 SPATA46Q5T0L3 261 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 MKXQ8IYA7 352 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 CMTM1Q8IZ96 169 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 Q8NFD4 153 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 OR5T1Q8NG75 326 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 MUCL1Q96DR8 90 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 FAM86C1Q9NVL1 165 aa6.84□□□□□ -1.31
TNFRSF10B-208ENST00000523752 TRBV23-1A0A0A0MS06 115 aa6.83□□□□□ -1.32
TNFRSF10B-208ENST00000523752 S100A8P05109 93 aa6.83□□□□□ -1.32
TNFRSF10B-208ENST00000523752 SRP19P09132 144 aaKnown RBP6.83□□□□□ -1.32
TNFRSF10B-208ENST00000523752 UCP1P25874 307 aa6.83□□□□□ -1.32
TNFRSF10B-208ENST00000523752 ERVFRD-1P60508 538 aa6.83□□□□□ -1.32
TNFRSF10B-208ENST00000523752 ID3Q02535 119 aa6.83□□□□□ -1.32
TNFRSF10B-208ENST00000523752 CDPF1Q6NVV7 123 aa6.83□□□□□ -1.32
TNFRSF10B-208ENST00000523752 PCSK4Q6UW60 755 aa6.83□□□□□ -1.32
TNFRSF10B-208ENST00000523752 TIPARPQ7Z3E1 657 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms