RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 GNG10P50151 68 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 IGLV3-21P80748 117 aaPredicted RBP14.16□□□□□ -0.14
USP42-207ENST00000521713 FAM78BQ5VT40 261 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 SLC25A40Q8TBP6 338 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 ADIPOR1Q96A54 375 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 NRIP2Q9BQI9 281 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.16□□□□□ -0.14
USP42-207ENST00000521713 CENPVL1A0A0U1RR11 272 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 TMEM210A6NLX4 147 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 PTP4A3O75365 173 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 CD1AP06126 327 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 HOXB1P14653 301 aaPredicted RBP14.16□□□□□ -0.14
USP42-207ENST00000521713 CDC34P49427 236 aaPredicted RBP14.16□□□□□ -0.14
USP42-207ENST00000521713 GNG4P50150 75 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 FAM3AP98173 230 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 MDP1Q86V88 176 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 TMEM105Q8N8V8 129 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 OR5AU1Q8NGC0 362 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 ATP5SQ99766 215 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 HES4Q9HCC6 221 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 CACNA1EQ15878 2313 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 ZNF207O43670 478 aaKnown RBP14.15□□□□□ -0.14
USP42-207ENST00000521713 ONECUT2O95948 504 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 TTRP02766 147 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 HLA-GP17693 338 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 TMEM147Q9BVK8 224 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 GOLT1BQ9Y3E0 138 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 SP6Q3SY56 376 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 PLPPR2Q96GM1 343 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 CA10Q9NS85 328 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 FAM24AA6NFZ4 105 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 OR4C45A6NMZ5 311 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 ASAH2BP0C7U1 165 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 BRS3P32247 399 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 BMI1P35226 326 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 MOGAT3Q86VF5 341 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 LIPGQ9Y5X9 500 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 CDIPTO14735 213 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 COX7A1P24310 79 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 OR3A1P47881 315 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 CLEC18BQ6UXF7 455 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 UBALD1Q8TB05 177 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 FRRS1LQ9P0K9 344 aa14.15□□□□□ -0.14
USP42-207ENST00000521713 PCM1Q15154 2024 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 MPTX1A8MV57 137 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 H3BQ15 152 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 TMPRSS2O15393 492 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 GCGP01275 180 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 GZMHP20718 246 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 CTHRC1Q96CG8 243 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 POM121Q96HA1 1249 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 CA11O75493 328 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 CD99P14209 185 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 RHOBP62745 196 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 MRGPRGQ86SM5 289 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 DEDDO75618 318 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 UPK3AO75631 287 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 MPV17LQ2QL34 196 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 OR10AD1Q8NGE0 317 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 MRGPRDQ8TDS7 321 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 NUDT16L1Q9BRJ7 211 aaKnown RBP14.14□□□□□ -0.15
USP42-207ENST00000521713 HEXA-AS1Q9H8Q6 139 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 SLC52A3Q9NQ40 469 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 DMRT1Q9Y5R6 373 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 TRAV34A0A0B4J273 112 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 PQLC2LA1A4F0 135 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 A6NDN8 102 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 CSRP1P21291 193 aaKnown RBP14.14□□□□□ -0.15
USP42-207ENST00000521713 CTSSP25774 331 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 FAM3BP58499 235 aaPredicted RBP14.14□□□□□ -0.15
USP42-207ENST00000521713 NHLH1Q02575 133 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 NHLH2Q02577 135 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 KHDC3LQ587J8 217 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 PRR27Q6MZM9 219 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 DIRC2Q96SL1 478 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 KIF13BQ9NQT8 1826 aa14.14□□□□□ -0.15
USP42-207ENST00000521713 OR10G4Q8NGN3 311 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 OR10G9Q8NGN4 311 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 OR10G7Q8NGN6 311 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 ZNF665Q9H7R5 613 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 RP1P56715 2156 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 DLL1O00548 723 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 FCGR3BO75015 233 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 NTN1O95631 604 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 CHRNA7P36544 502 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 PAFAH1B2P68402 229 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 HLA-DRB5Q30154 266 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 PPP1R32Q7Z5V6 425 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 FBLIM1Q8WUP2 373 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 MOB3AQ96BX8 217 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 ZNF236Q9UL36 1845 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 GAPDHP04406 335 aaKnown RBP14.13□□□□□ -0.15
USP42-207ENST00000521713 ERVS71-1P61550 626 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 TMEM104Q8NE00 496 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 OR10G8Q8NGN5 311 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 ZCCHC14Q8WYQ9 949 aaKnown RBP14.13□□□□□ -0.15
USP42-207ENST00000521713 STARD4Q96DR4 205 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 PRSS27Q9BQR3 290 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 LOC101059948A0A1B0GTJ6 334 aa14.13□□□□□ -0.15
USP42-207ENST00000521713 GABRA6Q16445 453 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms