RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 FRZBQ92765 325 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 CDS1Q92903 461 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 CCDC127Q96BQ5 260 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 MCEEQ96PE7 176 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 PEBP4Q96S96 227 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 PDCD1LG2Q9BQ51 273 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 NUDT9Q9BW91 350 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 SPACA1Q9HBV2 294 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 SND1-IT1Q9HBX3 110 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 C12orf4Q9NQ89 552 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 FBXO6Q9NRD1 293 aaPredicted RBP1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 SDHAF2Q9NX18 166 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 RHBDL2Q9NX52 303 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 STX18Q9P2W9 335 aaKnown RBP1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 NUP210LQ5VU65 1888 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 DOCK6Q96HP0 2047 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 EP400Q96L91 3159 aa1.98□□□□□ -2.09
HMGN1P28-201ENST00000521340 SNRNP200O75643 2136 aaKnown RBP1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 PTPRSQ13332 1948 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 ATG2AQ2TAZ0 1938 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 DYSFO75923 2080 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 COL4A6Q14031 1691 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 A0A0G2JND7 137 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 FAM159BA6NKW6 160 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 A8MUU9 505 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 APOC4-APOC2K7ER74 178 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 LGALS9O00182 355 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 SGCEO43556 437 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 APOC2P02655 101 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 MRPL3P09001 348 aaKnown RBP1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF806P0C7X5 589 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLC35E2BP0CK96 405 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 C1GALT1C1LP0DN25 315 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 NEFHP12036 1026 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 NQO2P16083 231 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 TEAD1P28347 426 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 RPL22P35268 128 aaKnown RBP1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 MAGEA12P43365 314 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR10A3P58181 314 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 PFN3P60673 137 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 RPL26P61254 145 aaKnown RBP1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 IL5RAQ01344 420 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF616Q08AN1 781 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 APOFQ13790 326 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 PIGHQ14442 188 aaPredicted RBP1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 CDNFQ49AH0 187 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 DNAL1Q4LDG9 190 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 AP1ARQ63HQ0 302 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 SELENOHQ8IZQ5 122 aaKnown RBP1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 SPICQ8N5J4 248 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 ATPAF2Q8N5M1 289 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLC25A29Q8N8R3 303 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR5B17Q8NGF7 314 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 JOSD2Q8TAC2 188 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 NT5CQ8TCD5 201 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 LINC00167Q96N53 147 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 CYTH2Q99418 400 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 CHCHD7Q9BUK0 85 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 YIPF3Q9GZM5 350 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR2S2Q9NQN1 319 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 SIRT7Q9NRC8 400 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 PARVAQ9NVD7 372 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 MS4A12Q9NXJ0 267 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 ENPP5Q9UJA9 477 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 KLF13Q9Y2Y9 288 aaPredicted RBP1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 GMEB1Q9Y692 573 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 TICRRQ7Z2Z1 1910 aa1.97□□□□□ -2.09
HMGN1P28-201ENST00000521340 LTBP2Q14767 1821 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 MYOFQ9NZM1 2061 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 HEATR5BQ9P2D3 2071 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 SPRR5A0A1B0GTR4 108 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 COLCA2A8K830 154 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 MKRN2OSH3BPM6 223 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 GOLGA8MH3BSY2 632 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 I3L4J1 428 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 GOLGA8RI6L899 631 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 COPEO14579 308 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 FFAR1O14842 300 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 BIRC5O15392 142 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 PLIN3O60664 434 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 CST8O60676 142 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 EIF1BO60739 113 aaKnown RBP1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 FADS2O95864 444 aaKnown RBP1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 LHBP01229 141 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 HLA-DQB1P01920 261 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 APOEP02649 317 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 BPGMP07738 259 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 SERPINA6P08185 405 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 KRT7P08729 469 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 KDELR1P24390 212 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 CRABP2P29373 138 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 MIPP30301 263 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 EIF1P41567 113 aaKnown RBP1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 ACOT2P49753 483 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 OR12D2P58182 307 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 MYL6P60660 151 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 DYNLT1P63172 113 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 BASP1P80723 227 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms