RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 SNAI3Q3KNW1 292 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 OR2AE1Q8NHA4 323 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 VN1R17PQ8TDU5 208 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 RP1L1Q8IWN7 2480 aaPredicted RBP8.79□□□□□ -1
PDGFRB-207ENST00000520579 TRAV36DV7A0A075B6V5 113 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 IGSF23A1L1A6 192 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 CLDN34H7C241 214 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 SPINK4O60575 86 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 HERV-K104P63124 156 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 HTD2P86397 168 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 PHF19Q5T6S3 580 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 TMEM144Q7Z5S9 345 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 ZNF695Q8IW36 515 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 PLXNA2O75051 1894 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 SHISA7A6NL88 538 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 PPP5D1E7EU14 171 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 DUSP1P28562 367 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 CLRN1P58418 232 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 PMP22Q01453 160 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 TMEM183BQ1AE95 376 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 C1orf100Q5SVJ3 147 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 DPPA3Q6W0C5 159 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 YAF2Q8IY57 180 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 OR8B12Q8NGG6 310 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 OR1N2Q8NGR9 330 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 SMIM7Q9BQ49 75 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 LIME1Q9H400 295 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 VSIRQ9H7M9 311 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 ZNF442Q9H7R0 627 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 ZNF586Q9NXT0 402 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 SEC11BP0C7V7 166 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 DRD1P21728 446 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 NKX2-1P43699 371 aaPredicted RBP8.79□□□□□ -1
PDGFRB-207ENST00000520579 SCAND1P57086 179 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 TGFBR3Q03167 851 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 ICAM4Q14773 271 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 ZNF141Q15928 474 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 C16orf82Q7Z2V1 217 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 OR2C3Q8N628 320 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 OR51H1Q8NH63 302 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 OR5B12Q96R08 314 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 TIMM29Q9BSF4 260 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 PECRQ9BY49 303 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 NKX2-4Q9H2Z4 354 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 TXNIPQ9H3M7 391 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 HIF1ANQ9NWT6 349 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 KLHL13Q9P2N7 655 aa8.79□□□□□ -1
PDGFRB-207ENST00000520579 IGHV3-64DA0A0J9YX35 117 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 ADAM20O43506 726 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 ARL3P36405 182 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 GLIPR1P48060 266 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 TAS2R46P59540 309 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 KISS1Q15726 138 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 TDRG1Q3Y452 100 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 ZNF787Q6DD87 383 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 OR1K1Q8NGR3 316 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 BTF3L4Q96K17 158 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 TMEM204Q9BSN7 226 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 BET1LQ9NYM9 111 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 HSPB7Q9UBY9 170 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 OSGIN2Q9Y236 505 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 POMT1Q9Y6A1 747 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 B9A039 149 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 TMEM150CB9EJG8 249 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 H7BYZ3 331 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 SAP30O75446 220 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 CTSEP14091 401 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 GLB1P16278 677 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 RAC3P60763 192 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 CKS1BP61024 79 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 GNB2P62879 340 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 OR8I2Q8N0Y5 310 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 OR52L2PQ8NGH6 319 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 WDR1O75083 606 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 CHRM2P08172 466 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 HOXB2P14652 356 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 EPHA8P29322 1005 aaPredicted RBP8.78□□□□□ -1
PDGFRB-207ENST00000520579 MTCP1P56278 107 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 NIT1Q86X76 327 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 TMEM171Q8WVE6 324 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 SCRT1Q9BWW7 348 aa8.78□□□□□ -1
PDGFRB-207ENST00000520579 A0A1B0GU03 582 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 CTSDP07339 412 aaPredicted RBP8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 CSNK1A1P48729 337 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 RPS21P63220 83 aaKnown RBP8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 ZXDAP98168 799 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 PRR31Q5SQ13 230 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 SLC37A2Q8TED4 501 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 ASB10Q8WXI3 467 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 SFRP2Q96HF1 295 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 S1PR5Q9H228 398 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 STRAPQ9Y3F4 350 aaKnown RBP8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 OR7C1O76099 320 aaPredicted RBP8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 PATE4P0C8F1 98 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 CCL5P13501 91 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 HIST1H3AP68431 136 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 RAB35Q15286 201 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 TMEM256Q8N2U0 113 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 CTHRC1Q96CG8 243 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 LYRM4Q9HD34 91 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms