RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CMTM1Q8IZ96 169 aa21.8■■□□□ 1.08
COL13A1-213ENST00000520267 ARV1Q9H2C2 271 aa21.8■■□□□ 1.08
COL13A1-213ENST00000520267 C11orf1Q9H5F2 150 aa21.8■■□□□ 1.08
COL13A1-213ENST00000520267 CNOT1A5YKK6 2376 aaKnown RBP21.8■■□□□ 1.08
COL13A1-213ENST00000520267 SPENQ96T58 3664 aaKnown RBP21.8■■□□□ 1.08
COL13A1-213ENST00000520267 ADAM20O43506 726 aa21.8■■□□□ 1.08
COL13A1-213ENST00000520267 NXPH2O95156 264 aa21.8■■□□□ 1.08
COL13A1-213ENST00000520267 MDH2P40926 338 aaKnown RBP21.8■■□□□ 1.08
COL13A1-213ENST00000520267 TINAGQ9UJW2 476 aa21.8■■□□□ 1.08
COL13A1-213ENST00000520267 PRR14LQ5THK1 2151 aa21.79■■□□□ 1.08
COL13A1-213ENST00000520267 ZNF891A8MT65 544 aaPredicted RBP21.79■■□□□ 1.08
COL13A1-213ENST00000520267 ZNF273Q14593 569 aa21.79■■□□□ 1.08
COL13A1-213ENST00000520267 GNMTQ14749 295 aa21.79■■□□□ 1.08
COL13A1-213ENST00000520267 ZNF497Q6ZNH5 498 aa21.79■■□□□ 1.08
COL13A1-213ENST00000520267 DKK4Q9UBT3 224 aa21.79■■□□□ 1.08
COL13A1-213ENST00000520267 NKX2-1P43699 371 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-213ENST00000520267 POLR2GP62487 172 aaKnown RBP eCLIP21.78■■□□□ 1.08
COL13A1-213ENST00000520267 C1orf162Q8NEQ5 155 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-213ENST00000520267 BOD1Q96IK1 185 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 OBP2BQ9NPH6 170 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 PLSCR4Q9NRQ2 329 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 TREM2Q9NZC2 230 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 H0Y980 276 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 MLNRO43193 412 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 WDR1O75083 606 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 ATG12O94817 140 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 TAGLNQ01995 201 aaKnown RBP21.78■■□□□ 1.08
COL13A1-213ENST00000520267 ZNF146Q15072 292 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 NMSQ5H8A3 153 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 CXorf67Q86X51 503 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-213ENST00000520267 PRR18Q8N4B5 295 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 ZNF610Q8N9Z0 462 aa21.78■■□□□ 1.08
COL13A1-213ENST00000520267 ID4P47928 161 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 TCF15Q12870 199 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 CXorf66Q5JRM2 361 aaPredicted RBP21.77■■□□□ 1.08
COL13A1-213ENST00000520267 BTNL8Q6UX41 500 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 OR5D13Q8NGL4 314 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 SPIN2AQ99865 258 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 SPIN2BQ9BPZ2 258 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 TRAPPC2LQ9UL33 140 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 CFAP47Q6ZTR5 3102 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 CACNA1GO43497 2377 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 CEBPDP49716 269 aaPredicted RBP21.77■■□□□ 1.08
COL13A1-213ENST00000520267 NUBP1P53384 320 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 UBALD1Q8TB05 177 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 OPN3Q9H1Y3 402 aaPredicted RBP21.77■■□□□ 1.08
COL13A1-213ENST00000520267 TREM1Q9NP99 234 aa21.77■■□□□ 1.08
COL13A1-213ENST00000520267 PURGQ9UJV8 347 aaKnown RBP21.77■■□□□ 1.08
COL13A1-213ENST00000520267 BORCS7-ASMTA0A0B4J1R7 106 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 FAM24AA6NFZ4 105 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 TMEM210A6NLX4 147 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 AHRRA9YTQ3 701 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 SH2D1BO14796 132 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 TNFSF13O75888 250 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 CECR9P0C854 216 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 F2RP25116 425 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 BLOC1S1P78537 153 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 SHEQ5VZ18 495 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 OR8G5Q8NG78 346 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 MAGT1Q9H0U3 335 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 FAM96BQ9Y3D0 163 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 INTS1Q8N201 2190 aaKnown RBP21.76■■□□□ 1.07
COL13A1-213ENST00000520267 DUXBA0A1W2PPF3 345 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 CLEC18AA5D8T8 446 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 DNASE2O00115 360 aaPredicted RBP21.76■■□□□ 1.07
COL13A1-213ENST00000520267 VDAC1P21796 283 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 EWSR1Q01844 656 aaKnown RBP eCLIP21.76■■□□□ 1.07
COL13A1-213ENST00000520267 ZNF169Q14929 603 aaPredicted RBP21.76■■□□□ 1.07
COL13A1-213ENST00000520267 Q6ZRG5 221 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 ZADH2Q8N4Q0 377 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 CLEC18CQ8NCF0 446 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 OR10V1Q8NGI7 309 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 TSNAXQ99598 290 aaKnown RBP21.76■■□□□ 1.07
COL13A1-213ENST00000520267 GINS3Q9BRX5 216 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 NKX6-2Q9C056 277 aaPredicted RBP21.76■■□□□ 1.07
COL13A1-213ENST00000520267 FZR1Q9UM11 496 aa21.76■■□□□ 1.07
COL13A1-213ENST00000520267 NPIPB11E5RHQ5 1161 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 ASCL1P50553 236 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 HOXA4Q00056 320 aaPredicted RBP21.75■■□□□ 1.07
COL13A1-213ENST00000520267 ZNF826PQ6ZT77 177 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 MOB1BQ7L9L4 216 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 C11orf53Q8IXP5 236 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 PARP12Q9H0J9 701 aaKnown RBP21.75■■□□□ 1.07
COL13A1-213ENST00000520267 PARP11Q9NR21 331 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 OR14J1Q9UGF5 321 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 CAV2P51636 162 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 TESK1Q15569 626 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 GUCA2BQ16661 112 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 OR2C3Q8N628 320 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 OR51H1Q8NH63 302 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 STARD4Q96DR4 205 aa21.75■■□□□ 1.07
COL13A1-213ENST00000520267 GTF3C1Q12789 2109 aa21.74■■□□□ 1.07
COL13A1-213ENST00000520267 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.74■■□□□ 1.07
COL13A1-213ENST00000520267 SSSCA1O60232 199 aa21.74■■□□□ 1.07
COL13A1-213ENST00000520267 IGLV2-14P01704 120 aa21.74■■□□□ 1.07
COL13A1-213ENST00000520267 MUC1P15941 1255 aaPredicted RBP21.74■■□□□ 1.07
COL13A1-213ENST00000520267 SEM1Q6ZVN7 128 aa21.74■■□□□ 1.07
COL13A1-213ENST00000520267 IL22RA2Q969J5 263 aa21.74■■□□□ 1.07
COL13A1-213ENST00000520267 HES4Q9HCC6 221 aa21.74■■□□□ 1.07
COL13A1-213ENST00000520267 UQCC1Q9NVA1 299 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms