RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 CLN8Q9UBY8 286 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 IL19Q9UHD0 177 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 IGLON5A6NGN9 336 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 OR5B21A6NL26 309 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 PSG1P11464 419 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 VIPR2P41587 438 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 KISS1Q15726 138 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 CCDC71LQ8N9Z2 235 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 OR8B12Q8NGG6 310 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 TIMM29Q9BSF4 260 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 TMEM222Q9H0R3 208 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 PLPP3O14495 311 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 MLNRO43193 412 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 GDF9O60383 454 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 VENTXO95231 258 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 MT-ATP6P00846 226 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 MLF1P58340 268 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 NSDHLQ15738 373 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 UEVLDQ8IX04 471 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 SELENOHQ8IZQ5 122 aaKnown RBP11.67□□□□□ -0.54
PABPC1-208ENST00000519004 BCL2L2Q92843 193 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-208ENST00000519004 PSMG3Q9BT73 122 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-208ENST00000519004 SAMD10Q9BYL1 202 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 ZNF430Q9H8G1 570 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-208ENST00000519004 ZDHHC11Q9H8X9 412 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 BRCA2P51587 3418 aa11.67□□□□□ -0.54
PABPC1-208ENST00000519004 IGHV2-26A0A0B4J1V2 119 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 IGHV1-69-2A0A0G2JMI3 117 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 C17orf51A8MQB3 221 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 H0YGG7 62 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 MPPED1O15442 326 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 POU2F2P09086 479 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 CYBAP13498 195 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 FAHP16930 419 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 PLA2G5P39877 138 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 ARF3P61204 181 aaPredicted RBP11.66□□□□□ -0.54
PABPC1-208ENST00000519004 SRPXP78539 464 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 TMEM267Q0VDI3 215 aaPredicted RBP11.66□□□□□ -0.54
PABPC1-208ENST00000519004 TESK1Q15569 626 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 MYPOPQ86VE0 399 aaPredicted RBP11.66□□□□□ -0.54
PABPC1-208ENST00000519004 ZNF295-AS1Q8N0V1 137 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 C11orf40Q8WZ69 217 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 TMEM56Q96MV1 263 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 UHRF2Q96PU4 802 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 SLC35D1Q9NTN3 355 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 MRPL27Q9P0M9 148 aaKnown RBP11.66□□□□□ -0.54
PABPC1-208ENST00000519004 SH3BGRL2Q9UJC5 107 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 VDAC3Q9Y277 283 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 TMEM56-RWDD3S4R434 201 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 A0A1W2PRS3 328 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 IGLC7A0M8Q6 106 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 CRISP2P16562 243 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 FOXL1Q12952 345 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 DNM1P34Q6PK57 102 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 FAM180AQ6UWF9 173 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 ZNF695Q8IW36 515 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 CRIPAKQ8N1N5 446 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 SCGB1C1Q8TD33 95 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 LHX4Q969G2 390 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 RTN4RQ9BZR6 473 aa11.66□□□□□ -0.54
PABPC1-208ENST00000519004 LOC102724200A0A096LPH7 203 aaPredicted RBP11.65□□□□□ -0.54
PABPC1-208ENST00000519004 H3BP45 60 aa11.65□□□□□ -0.54
PABPC1-208ENST00000519004 C8AP07357 584 aa11.65□□□□□ -0.54
PABPC1-208ENST00000519004 P2RY2P41231 377 aa11.65□□□□□ -0.54
PABPC1-208ENST00000519004 TCTN1Q2MV58 587 aa11.65□□□□□ -0.54
PABPC1-208ENST00000519004 NMSQ5H8A3 153 aa11.65□□□□□ -0.54
PABPC1-208ENST00000519004 ERASQ7Z444 233 aa11.65□□□□□ -0.54
PABPC1-208ENST00000519004 OR4F5Q8NH21 305 aa11.65□□□□□ -0.54
PABPC1-208ENST00000519004 GATAD1Q8WUU5 269 aa11.65□□□□□ -0.54
PABPC1-208ENST00000519004 OR4F4Q96R69 305 aa11.65□□□□□ -0.54
PABPC1-208ENST00000519004 MOB1AQ9H8S9 216 aa11.65□□□□□ -0.54
PABPC1-208ENST00000519004 ZNF586Q9NXT0 402 aa11.65□□□□□ -0.54
PABPC1-208ENST00000519004 PTRH2Q9Y3E5 179 aaKnown RBP11.65□□□□□ -0.54
PABPC1-208ENST00000519004 AQP7P3A6NL99 342 aa11.65□□□□□ -0.55
PABPC1-208ENST00000519004 CD99P14209 185 aa11.65□□□□□ -0.55
PABPC1-208ENST00000519004 PSMB3P49720 205 aa11.65□□□□□ -0.55
PABPC1-208ENST00000519004 ZNF133P52736 654 aaPredicted RBP11.65□□□□□ -0.55
PABPC1-208ENST00000519004 CLDN18P56856 261 aa11.65□□□□□ -0.55
PABPC1-208ENST00000519004 MRPL49Q13405 166 aaKnown RBP11.65□□□□□ -0.55
PABPC1-208ENST00000519004 SNAI3Q3KNW1 292 aa11.65□□□□□ -0.55
PABPC1-208ENST00000519004 C20orf196Q8IYI0 205 aa11.65□□□□□ -0.55
PABPC1-208ENST00000519004 ZIC4Q8N9L1 334 aa11.65□□□□□ -0.55
PABPC1-208ENST00000519004 ZNF721Q8TF20 911 aa11.65□□□□□ -0.55
PABPC1-208ENST00000519004 OR6C1Q96RD1 312 aa11.65□□□□□ -0.55
PABPC1-208ENST00000519004 FAM103A1Q9BTL3 118 aaKnown RBP11.65□□□□□ -0.55
PABPC1-208ENST00000519004 CDC42EP3Q9UKI2 254 aa11.65□□□□□ -0.55
PABPC1-208ENST00000519004 FAM166BA8MTA8 275 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 RNF212BA8MTL3 300 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 TNFSF14O43557 240 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 GPX1P07203 203 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 CCL1P22362 96 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 APOBEC3AP31941 199 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-208ENST00000519004 CCR2P41597 374 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 HYAL1Q12794 435 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 FIGLAQ6QHK4 219 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 SIGLECL1Q8N7X8 197 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 ASB10Q8WXI3 467 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 FAM3CQ92520 227 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 Q96M66 194 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 KLHL13Q9P2N7 655 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms