RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 KCNIP1Q9NZI2 227 aa12.37□□□□□ -0.43
PDCD6-211ENST00000515587 COMMD3Q9UBI1 195 aa12.37□□□□□ -0.43
PDCD6-211ENST00000515587 AK3Q9UIJ7 227 aa12.37□□□□□ -0.43
PDCD6-211ENST00000515587 NUP50Q9UKX7 468 aa12.37□□□□□ -0.43
PDCD6-211ENST00000515587 TRAV40A0A0B4J280 105 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 KBTBD11-OT1A0A1B0GTJ5 212 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 RAB27BO00194 218 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 CD3GP09693 182 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 IGHV1-8P0DP01 117 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 HIST1H1DP16402 221 aaKnown RBP12.36□□□□□ -0.43
PDCD6-211ENST00000515587 DLX6P56179 175 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 MOGAT2Q3SYC2 334 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 PLAC9Q5JTB6 97 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 OR52W1Q6IF63 320 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 MOB1BQ7L9L4 216 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 GAPTQ8N292 157 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 SETD6Q8TBK2 473 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 SLC25A38Q96DW6 304 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 CMTM3Q96MX0 182 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 CMSS1Q9BQ75 279 aaKnown RBP12.36□□□□□ -0.43
PDCD6-211ENST00000515587 C12orf4Q9NQ89 552 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 CALYQ9NYX4 217 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 CCDC59Q9P031 241 aaKnown RBP12.36□□□□□ -0.43
PDCD6-211ENST00000515587 SESN1Q9Y6P5 492 aa12.36□□□□□ -0.43
PDCD6-211ENST00000515587 TRAV39A0A0B4J263 110 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 SERPINE3A8MV23 424 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 ORC5O43913 435 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 GNB3P16520 340 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 CDK2P24941 298 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 TALDO1P37837 337 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 BPIFB3P59826 476 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 ARFRP1Q13795 201 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 CDNFQ49AH0 187 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 HEPN1Q6WQI6 88 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 ZNF782Q6ZMW2 699 aaPredicted RBP12.35□□□□□ -0.43
PDCD6-211ENST00000515587 OR13D1Q8NGV5 346 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 MRPL30Q8TCC3 161 aaKnown RBP12.35□□□□□ -0.43
PDCD6-211ENST00000515587 DYNC2LI1Q8TCX1 351 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 TMEM158Q8WZ71 300 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 ARL11Q969Q4 196 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 MS4A7Q9GZW8 240 aaPredicted RBP12.35□□□□□ -0.43
PDCD6-211ENST00000515587 RBM38Q9H0Z9 239 aaKnown RBP12.35□□□□□ -0.43
PDCD6-211ENST00000515587 ABCG5Q9H222 651 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 MGAT4AQ9UM21 535 aa12.35□□□□□ -0.43
PDCD6-211ENST00000515587 IGHV3OR16-10A0A075B7F0 116 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 IGHV1-69DA0A0B4J2H0 117 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 CENPVL3A0A0U1RRI6 287 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 POM121CA8CG34 1229 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 MFNGO00587 321 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 SPINT2O43291 252 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 FSHBP01225 129 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 IGHV1-69P01742 117 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 APOA1P02647 267 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 GSTP1P09211 210 aaKnown RBP12.34□□□□□ -0.43
PDCD6-211ENST00000515587 IGHV4-38-2P0DP08 117 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 EPHA1P21709 976 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 FPR2P25090 351 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 KLF17Q5JT82 389 aaPredicted RBP12.34□□□□□ -0.43
PDCD6-211ENST00000515587 PRAMEF5Q5TYX0 476 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 ZNF554Q86TJ5 538 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 OR10A7Q8NGE5 316 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 ZMAT3Q9HA38 289 aaKnown RBP12.34□□□□□ -0.43
PDCD6-211ENST00000515587 IDI2-AS1Q9NZ38 188 aa12.34□□□□□ -0.43
PDCD6-211ENST00000515587 TRAV18A0A075B6X5 111 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 TRBV6-6A0A0A6YYG2 114 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 FAM25AB3EWG3 89 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 FAM25CB3EWG5 89 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 FAM25GB3EWG6 89 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 RNASEK-C17orf49H0YIS7 233 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 RGS5O15539 181 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 NAPSAO96009 420 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 FAM157CP0CG43 387 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 CGB3P0DN86 165 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 CGB7P0DN87 165 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 RCC1P18754 421 aaPredicted RBP12.33□□□□□ -0.44
PDCD6-211ENST00000515587 OMGP23515 440 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 COX7A1P24310 79 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 NFYBP25208 207 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 SSTR5P35346 364 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 MNDAP41218 407 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 UBE2E1P51965 193 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 PITPNAQ00169 270 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 KLRD1Q13241 179 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 PNLIPRP3Q17RR3 467 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 C17orf58Q2M2W7 97 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 TMEM30BQ3MIR4 351 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 TMEM69Q5SWH9 247 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 OLFML2AQ68BL7 652 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 RTN4RL2Q86UN3 420 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 PDZD9Q8IXQ8 264 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 PNKDQ8N490 385 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 C11orf42Q8N5U0 333 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 RFESDQ8TAC1 157 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 TNFRSF14Q92956 283 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 DGCR14Q96DF8 476 aaKnown RBP12.33□□□□□ -0.44
PDCD6-211ENST00000515587 SUCNR1Q9BXA5 334 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 TMEM133Q9H2Q1 129 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 LINC00574Q9H8X3 128 aa12.33□□□□□ -0.44
PDCD6-211ENST00000515587 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.33□□□□□ -0.443e-6■■■■■ 41.3
PDCD6-211ENST00000515587 MBNL3Q9NUK0 354 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms