RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 FAM60AQ9NP50 221 aa11.05□□□□□ -0.64
SMAD1-215ENST00000515385 SLC39A9Q9NUM3 307 aa11.05□□□□□ -0.64
SMAD1-215ENST00000515385 ALKBH4Q9NXW9 302 aa11.05□□□□□ -0.64
SMAD1-215ENST00000515385 SLC45A2Q9UMX9 530 aa11.05□□□□□ -0.64
SMAD1-215ENST00000515385 WIPI2Q9Y4P8 454 aa11.05□□□□□ -0.64
SMAD1-215ENST00000515385 IGHG1P01857 330 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 IL3RAP26951 378 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 WASP42768 502 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 PPP1CBP62140 327 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 PLCXD2Q0VAA5 305 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 FOXL1Q12952 345 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 LRRC75BQ2VPJ9 315 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 DEFB110Q30KQ9 67 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 TRIM61Q5EBN2 209 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 CST9LP1Q5W188 147 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 MRPL30Q8TCC3 161 aaKnown RBP11.04□□□□□ -0.64
SMAD1-215ENST00000515385 RPUSD4Q96CM3 377 aaKnown RBP11.04□□□□□ -0.64
SMAD1-215ENST00000515385 ALKBH7Q9BT30 221 aaPredicted RBP11.04□□□□□ -0.64
SMAD1-215ENST00000515385 WWTR1Q9GZV5 400 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 PNO1Q9NRX1 252 aaKnown RBP11.04□□□□□ -0.64
SMAD1-215ENST00000515385 TIMM9Q9Y5J7 89 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 OTOL1A6NHN0 477 aaPredicted RBP11.04□□□□□ -0.64
SMAD1-215ENST00000515385 SLC31A1O15431 190 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 TOMM40O96008 361 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 IGKV3-11P04433 115 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 YPEL3P61236 119 aaPredicted RBP11.04□□□□□ -0.64
SMAD1-215ENST00000515385 ARF6P62330 175 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 HBG1P69891 147 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 HBG2P69892 147 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 UBE2V1Q13404 147 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 C2orf27AQ580R0 203 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 SLC25A47Q6Q0C1 308 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 TMEM144Q7Z5S9 345 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 OR5D13Q8NGL4 314 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 FAM131CQ96AQ9 280 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 LYZL4Q96KX0 146 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 RSG1Q9BU20 258 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 PAM16Q9Y3D7 125 aa11.04□□□□□ -0.64
SMAD1-215ENST00000515385 PRRC2BQ5JSZ5 2229 aaKnown RBP11.03□□□□□ -0.64
SMAD1-215ENST00000515385 A0A0U1RQK1 487 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 ZNF320A2RRD8 509 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 CCL25O15444 150 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 OR2J2O76002 312 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 CTXN2P0C2S0 81 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 NBEAP1P0C6P0 100 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 GNRHRP30968 328 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 VIPR2P41587 438 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 VHLLQ6RSH7 139 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 Q6ZWC4 215 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 TSACCQ96A04 125 aaPredicted RBP11.03□□□□□ -0.64
SMAD1-215ENST00000515385 MMABQ96EY8 250 aaPredicted RBP11.03□□□□□ -0.64
SMAD1-215ENST00000515385 LIN37Q96GY3 246 aaPredicted RBP11.03□□□□□ -0.64
SMAD1-215ENST00000515385 CHODLQ9H9P2 273 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 UQCR10Q9UDW1 63 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 TMEM131Q92545 1883 aa11.03□□□□□ -0.64
SMAD1-215ENST00000515385 H0YIG0 161 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 CNOT4O95628 575 aaKnown RBP11.02□□□□□ -0.64
SMAD1-215ENST00000515385 CTSBP07858 339 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 GCH1P30793 250 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 MPLP40238 635 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 TFPI2P48307 235 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 ASCL4Q6XD76 172 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 LINC01551Q86U37 167 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 ZNF525Q8N782 197 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 OR5AU1Q8NGC0 362 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 ZNF721Q8TF20 911 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 PIGTQ969N2 578 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 EMC6Q9BV81 110 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 VSIRQ9H7M9 311 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 ZNF160Q9HCG1 818 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 RNF186Q9NXI6 227 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 PIGLQ9Y2B2 252 aa11.02□□□□□ -0.64
SMAD1-215ENST00000515385 ANKUB1A6NFN9 424 aa11.02□□□□□ -0.65
SMAD1-215ENST00000515385 CBY3A6NI87 242 aa11.02□□□□□ -0.65
SMAD1-215ENST00000515385 LIPT2A6NK58 231 aa11.02□□□□□ -0.65
SMAD1-215ENST00000515385 TMEM150CB9EJG8 249 aa11.02□□□□□ -0.65
SMAD1-215ENST00000515385 RER1O15258 196 aa11.02□□□□□ -0.65
SMAD1-215ENST00000515385 FAHP16930 419 aa11.02□□□□□ -0.65
SMAD1-215ENST00000515385 SUMO3P55854 103 aaPredicted RBP11.02□□□□□ -0.65
SMAD1-215ENST00000515385 RTP5Q14D33 572 aa11.02□□□□□ -0.65
SMAD1-215ENST00000515385 SRSF7Q16629 238 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMAD1-215ENST00000515385 CLEC12BQ2HXU8 276 aa11.02□□□□□ -0.65
SMAD1-215ENST00000515385 FAM78BQ5VT40 261 aa11.02□□□□□ -0.65
SMAD1-215ENST00000515385 Q6ZS49 121 aa11.02□□□□□ -0.65
SMAD1-215ENST00000515385 NEIL1Q96FI4 390 aaPredicted RBP11.02□□□□□ -0.65
SMAD1-215ENST00000515385 RNF2Q99496 336 aa11.02□□□□□ -0.65
SMAD1-215ENST00000515385 ZNF552Q9H707 407 aaPredicted RBP11.02□□□□□ -0.65
SMAD1-215ENST00000515385 ALPK2Q86TB3 2170 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 TRAV9-1A0A075B6T8 112 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 KIR2DS5A0A0G2JLQ3 304 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 A0A0G2JNG1 304 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 C17orf51A8MQB3 221 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 KIR2DS3K7RE56 304 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 HS3ST1O14792 307 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 MLNRO43193 412 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 NUPR1O60356 82 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 ZNF205O95201 554 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 OR5G3P0C626 314 aa11.01□□□□□ -0.65
SMAD1-215ENST00000515385 HNRNPA2B1P22626 353 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms