RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ZNF426Q9BUY5 554 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 CHST5Q9GZS9 411 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 SIRPDQ9H106 197 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 GNB4Q9HAV0 340 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 SLC35D1Q9NTN3 355 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 GFOD1Q9NXC2 390 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 IGKV1D-42A0A075B6H8 117 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 A0A0B4J293 547 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 KBTBD11-OT1A0A1B0GTJ5 212 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 FAM223BA6NKX1 122 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 NPIPB11E5RHQ5 1161 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 GABARAPH6UMI1 98 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 NUPL2O15504 423 aaKnown RBP2.33□□□□□ -2.04
CLOCK-209ENST00000511124 CRTAPO75718 401 aaPredicted RBP2.33□□□□□ -2.04
CLOCK-209ENST00000511124 GABARAPO95166 117 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 AMBPP02760 352 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 SBK3P0C264 359 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 HLA-DOBP13765 273 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 HTR1FP30939 366 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 ZNF93P35789 620 aaPredicted RBP2.33□□□□□ -2.04
CLOCK-209ENST00000511124 EGR4Q05215 589 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 HNF4GQ14541 408 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 ECSCRQ19T08 205 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 HLA-DRB5Q30154 266 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 MESTQ5EB52 335 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 FAM219BQ5XKK7 198 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 WDR82Q6UXN9 313 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 MAVSQ7Z434 540 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 PDPNQ86YL7 162 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 FAM223AQ8IWN6 122 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 ARPC1AQ92747 370 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 RRNAD1Q96FB5 475 aaKnown RBP2.33□□□□□ -2.04
CLOCK-209ENST00000511124 UBE2E2Q96LR5 201 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 SORT1Q99523 831 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 TMEM59Q9BXS4 323 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 WDR12Q9GZL7 423 aaKnown RBP2.33□□□□□ -2.04
CLOCK-209ENST00000511124 ISYNA1Q9NPH2 558 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 MRPL22Q9NWU5 206 aaKnown RBP2.33□□□□□ -2.04
CLOCK-209ENST00000511124 KCNE5Q9UJ90 142 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 MED12LQ86YW9 2145 aa2.33□□□□□ -2.04
CLOCK-209ENST00000511124 IGHV2-26A0A0B4J1V2 119 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 LOC107986453A0A1B0GWG9 222 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 C11orf94C9JXX5 98 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 NBR2O15453 112 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 ZNF205O95201 554 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 IGHV4-38-2P0DP08 117 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 SLC2A1P11166 492 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 GP9P14770 177 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 HTR2CP28335 458 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 CD34P28906 385 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 WNT5AP41221 380 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 PROK1P58294 105 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 CXCR4P61073 352 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 HIST1H3AP68431 136 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 ELF3P78545 371 aaPredicted RBP2.32□□□□□ -2.04
CLOCK-209ENST00000511124 FAM3AP98173 230 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 MAB21L1Q13394 359 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 RAB31Q13636 194 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 ZSCAN26Q16670 478 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 LTC4SQ16873 150 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 HIST2H3PS2Q5TEC6 136 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 STUMQ69YW2 141 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 STEAP1BQ6NZ63 245 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 CYP2R1Q6VVX0 501 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 HIST2H3AQ71DI3 136 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 FAM216BQ8N7L0 139 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 C11orf44Q8N8P7 122 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 C8orf31Q8N9H6 132 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 OR13C9Q8NGT0 318 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 OR4S2Q8NH73 311 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 OR4A5Q8NH83 315 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 OR10J5Q8NHC4 309 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 ANGPTL6Q8NI99 470 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 MUL1Q969V5 352 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 SGK3Q96BR1 496 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 ATG101Q9BSB4 218 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 HRASLSQ9HDD0 168 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 ING1Q9UK53 422 aaPredicted RBP2.32□□□□□ -2.04
CLOCK-209ENST00000511124 RHBDD3Q9Y3P4 386 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 PEX16Q9Y5Y5 336 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 SNRNP200O75643 2136 aaKnown RBP2.32□□□□□ -2.04
CLOCK-209ENST00000511124 TRAV30A0A087WSZ9 112 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 IGLV1-36A0A0B4J1U3 117 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 TMEM189A5PLL7 270 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 A6NDX4 124 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 C17orf98A8MV24 154 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 WRBO00258 174 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 GGCTO75223 188 aaKnown RBP2.32□□□□□ -2.04
CLOCK-209ENST00000511124 CFDP00746 253 aaPredicted RBP2.32□□□□□ -2.04
CLOCK-209ENST00000511124 CSN2P05814 226 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 ANXA3P12429 323 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 HCFC1P51610 2035 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 LUMP51884 338 aaPredicted RBP2.32□□□□□ -2.04
CLOCK-209ENST00000511124 B2MP61769 119 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 TSPAN5P62079 268 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 HSD17B12Q53GQ0 312 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 YIF1BQ5BJH7 314 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 RBM48Q5RL73 367 aaKnown RBP2.32□□□□□ -2.04
CLOCK-209ENST00000511124 LPCAT4Q643R3 524 aa2.32□□□□□ -2.04
CLOCK-209ENST00000511124 DLEU7Q6UYE1 221 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms