RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 DCAF10Q5QP82 559 aa14.69□□□□□ -0.06
SQSTM1-211ENST00000506690 SHISA6Q6ZSJ9 500 aa14.69□□□□□ -0.06
SQSTM1-211ENST00000506690 MRPL41Q8IXM3 137 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-211ENST00000506690 SPTSSAQ969W0 71 aa14.69□□□□□ -0.06
SQSTM1-211ENST00000506690 PIAS2O75928 621 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 MMP7P09237 267 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 DAZAP2Q15038 168 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 PDCD1Q15116 288 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 IL22RA2Q969J5 263 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 PCGF1Q9BSM1 259 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 PLEK2Q9NYT0 353 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 H3BP45 60 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 KBTBD11O94819 623 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 IFNA1P01562 189 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 LTBRP36941 435 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 MDH2P40926 338 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 IDH3GP51553 393 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 CCR5P51681 352 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 RPL23P62829 140 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 TMEM267Q0VDI3 215 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 HERPUD1Q15011 391 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 ACOT6Q3I5F7 207 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 KIAA0895LQ68EN5 471 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 Q6ZS49 121 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 OR5D13Q8NGL4 314 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 SCGB1C1Q8TD33 95 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 TMEM37Q8WXS4 190 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 TMEM54Q969K7 222 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 OR5B12Q96R08 314 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 ZNF442Q9H7R0 627 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 FUT9Q9Y231 359 aa14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 CHD3Q12873 2000 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-211ENST00000506690 KIAA1324LA8MWY0 1029 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 H7BYZ3 331 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 SOX15O60248 233 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 HRASP01112 189 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 MBP02144 154 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 RBM11P57052 281 aaKnown RBP14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 GNB2P62879 340 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 SERF2P84101 59 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 TMEM42Q69YG0 159 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 GBGT1Q8N5D6 347 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 NFAM1Q8NET5 270 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 ELOVL1Q9BW60 279 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 DLEU1O43261 78 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 CRYGSP22914 178 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 TDHQ8IZJ6 230 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 KLHDC7BQ96G42 594 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 TMEM208Q9BTX3 173 aa14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 POLR3KQ9Y2Y1 108 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-211ENST00000506690 IGKV1D-13A0A0B4J2D9 117 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 SLC22A20A6NK97 555 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 ZNF737O75373 536 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 CRYABP02511 175 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 TYMSP04818 313 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 IGKV1-13P0DP09 117 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 ELLP55199 621 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 MRPS21P82921 87 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 GAGE1Q13065 139 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 RAB40CQ96S21 281 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 REPIN1Q9BWE0 567 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 OR6C3Q9NZP0 311 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 PIAS3Q9Y6X2 628 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 MED12Q93074 2177 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 A0A0G2JRQ6 117 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 A0A1B0GX78 115 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 MAP1LC3B2A6NCE7 125 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 H0Y980 276 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 GGCTO75223 188 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 MEF2BQ02080 365 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 ZNF525Q8N782 197 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 THOC3Q96J01 351 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 MAP1LC3BQ9GZQ8 125 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 FKBP11Q9NYL4 201 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 CBY1Q9Y3M2 126 aa14.66□□□□□ -0.06
SQSTM1-211ENST00000506690 A0A1W2PPQ1 181 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 LRRC3CA6NJW4 275 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 NRASP01111 189 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 PRSS12P56730 875 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 PRSS8Q16651 343 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 TMEM41BQ5BJD5 291 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 CISD2Q8N5K1 135 aaKnown RBP14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 OR2M3Q8NG83 312 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 GOLT1BQ9Y3E0 138 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 GON4LQ3T8J9 2241 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 EYSQ5T1H1 3165 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 M0QZK8 103 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 DHHO43323 396 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 TUSC2O75896 110 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 CST2P09228 141 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 RPS18P62269 152 aaKnown RBP14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 SRSF7Q16629 238 aaKnown RBP eCLIP14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 LRRC75BQ2VPJ9 315 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 MRPL52Q86TS9 123 aaKnown RBP14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 C17orf82Q86X59 251 aaPredicted RBP14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 ZNF576Q9H609 170 aa14.65□□□□□ -0.06
SQSTM1-211ENST00000506690 TMEM250H0YL14 139 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 TNFSF12O43508 249 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 SCGB1D1O95968 90 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 SLC25A6P12236 298 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms