RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 FGF16O43320 207 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 GRPP07492 148 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 FGF2P09038 288 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 ASCL5Q7RTU5 278 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 ERGIC1Q969X5 290 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 SLC25A31Q9H0C2 315 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 TINAGQ9UJW2 476 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 GTF3C1Q12789 2109 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 SIRPB1O00241 398 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 MLNRO43193 412 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 HKR1P10072 659 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 KLF3P57682 345 aaPredicted RBP9.59□□□□□ -0.87
NFKB1-205ENST00000505458 ERVS71-1P61550 626 aa9.59□□□□□ -0.87
NFKB1-205ENST00000505458 INTS1Q8N201 2190 aaKnown RBP9.59□□□□□ -0.87
NFKB1-205ENST00000505458 A8MXK9 166 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 F2RP25116 425 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 BLOC1S1P78537 153 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 OR4D5Q8NGN0 318 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 HS3ST6Q96QI5 342 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 HSPA12AO43301 675 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 M6PRP20645 277 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 ESPL1Q14674 2120 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 SLC35G3Q8N808 338 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 UBAC2Q8NBM4 344 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 LSM10Q969L4 123 aaKnown RBP9.58□□□□□ -0.88
NFKB1-205ENST00000505458 RRNAD1Q96FB5 475 aaKnown RBP9.58□□□□□ -0.88
NFKB1-205ENST00000505458 LURAP1Q96LR2 239 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 REG4Q9BYZ8 158 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 CYTL1Q9NRR1 136 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 LSM5Q9Y4Y9 91 aaKnown RBP9.58□□□□□ -0.88
NFKB1-205ENST00000505458 HSPB6O14558 160 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 TNFSF4P23510 183 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 IGFBP7Q16270 282 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 WDR82Q6UXN9 313 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 ZNF818PQ6ZRF7 136 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 LYZL2Q7Z4W2 148 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 SELENOHQ8IZQ5 122 aaKnown RBP9.58□□□□□ -0.88
NFKB1-205ENST00000505458 ARL11Q969Q4 196 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 S100PBPQ96BU1 408 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 CYYR1Q96J86 154 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 TP53RKQ96S44 253 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 DIRC2Q96SL1 478 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 PLEKHF2Q9H8W4 249 aa9.58□□□□□ -0.88
NFKB1-205ENST00000505458 IGKV1-6A0A0C4DH72 117 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 A0A1B0GU03 582 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 MPTX1A8MV57 137 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 K7ENP7 123 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 MBPP02686 304 aaPredicted RBP9.57□□□□□ -0.88
NFKB1-205ENST00000505458 SERPINE2P07093 398 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 NKX2-1P43699 371 aaPredicted RBP9.57□□□□□ -0.88
NFKB1-205ENST00000505458 ZNF474Q6S9Z5 364 aaPredicted RBP9.57□□□□□ -0.88
NFKB1-205ENST00000505458 IL34Q6ZMJ4 242 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 BATF2Q8N1L9 274 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 NUP37Q8NFH4 326 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 NINJ1Q92982 152 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 GALMQ96C23 342 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 PRR13Q9NZ81 148 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 IGLV3-9A0A075B6K5 115 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 VSTM5A8MXK1 200 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 PGLYRP1O75594 196 aaPredicted RBP9.57□□□□□ -0.88
NFKB1-205ENST00000505458 GLI4P10075 376 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 RAB5CP51148 216 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 NKX6-1P78426 367 aaPredicted RBP9.57□□□□□ -0.88
NFKB1-205ENST00000505458 BAXQ07812 192 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 FOXC1Q12948 553 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 TMEM30BQ3MIR4 351 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 BEX5Q5H9J7 111 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 MEX3BQ6ZN04 569 aaKnown RBP9.57□□□□□ -0.88
NFKB1-205ENST00000505458 OR11L1Q8NGX0 322 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 MSRB2Q9Y3D2 182 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 SHANK1Q9Y566 2161 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 A8MXE2 369 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 SCGB1D2O95969 90 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 FABP6P51161 128 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 ALKBH6Q3KRA9 238 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 SP6Q3SY56 376 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 SPACA3Q8IXA5 215 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 PLPPR1Q8TBJ4 325 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 TAF9BQ9HBM6 251 aa9.57□□□□□ -0.88
NFKB1-205ENST00000505458 M0R1B8 84 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 GATA4P43694 442 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 TDGF1P3P51864 188 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 VAMP2P63027 116 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 CATR1Q13166 79 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 C11orf53Q8IXP5 236 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 C1QTNF6Q9BXI9 259 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 CCL28Q9NRJ3 127 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 LAMP3Q9UQV4 416 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 RBM7Q9Y580 266 aaKnown RBP9.56□□□□□ -0.88
NFKB1-205ENST00000505458 SRRM5B3KS81 715 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 HEXAP06865 529 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 ADH4P08319 380 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 ZNF266Q14584 549 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 NMSQ5H8A3 153 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 TMEM108Q6UXF1 575 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 FAM219AQ8IW50 185 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 MARC2Q969Z3 335 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 CXorf58Q96LI9 332 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 NGBQ9NPG2 151 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 ERRFI1Q9UJM3 462 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms