RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 F10P00742 488 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 MMP7P09237 267 aaPredicted RBP10.17□□□□□ -0.78
UBE3D-206ENST00000505226 HIST1H1BP16401 226 aaKnown RBP10.17□□□□□ -0.78
UBE3D-206ENST00000505226 CD200P41217 278 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 FGF8P55075 233 aaPredicted RBP10.17□□□□□ -0.78
UBE3D-206ENST00000505226 CARD18P57730 90 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 RAB11AP62491 216 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 OR2T2Q6IF00 324 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 PCSK4Q6UW60 755 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 Q6ZS49 121 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 WDR5BQ86VZ2 330 aa10.17□□□□□ -0.78
UBE3D-206ENST00000505226 SNIP1Q8TAD8 396 aaKnown RBP10.17□□□□□ -0.78
UBE3D-206ENST00000505226 SF3B5Q9BWJ5 86 aaKnown RBP10.17□□□□□ -0.78
UBE3D-206ENST00000505226 ZFP92A6NM28 416 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 SSR4P51571 173 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 GPM6AP51674 278 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 BAXQ07812 192 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 MYPOPQ86VE0 399 aaPredicted RBP10.16□□□□□ -0.78
UBE3D-206ENST00000505226 SPSB4Q96A44 273 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 GPR146Q96CH1 333 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 RBMXL1Q96E39 390 aaKnown RBP10.16□□□□□ -0.78
UBE3D-206ENST00000505226 CBR3O75828 277 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 FABP4P15090 132 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 TLE4Q04727 773 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 COL19A1Q14993 1142 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 OR56B2PQ8NGI1 322 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 FAM210BQ96KR6 192 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 GPR35Q9HC97 309 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 PRDM6Q9NQX0 595 aa10.16□□□□□ -0.78
UBE3D-206ENST00000505226 CD55P08174 381 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 PGA5P0DJD9 388 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 ZNF880Q6PDB4 577 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 LCN15Q6UWW0 184 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 ABHD3Q8WU67 409 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 ABHD14BQ96IU4 210 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 C1QTNF5Q9BXJ0 243 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 KIAA2026Q5HYC2 2103 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 PPP1R2P9O14990 202 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 IL24Q13007 206 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 HAPLN4Q86UW8 402 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 OR5D13Q8NGL4 314 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 ZNF845Q96IR2 970 aaPredicted RBP10.15□□□□□ -0.78
UBE3D-206ENST00000505226 OPA3Q9H6K4 179 aa10.15□□□□□ -0.78
UBE3D-206ENST00000505226 NBEAQ8NFP9 2946 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 TRAV1-1A0A0B4J248 108 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 A0A1B0GU03 582 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 IGKV1-39P01597 117 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 IGKV1D-39P04432 117 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 DEFA6Q01524 100 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 RNPS1Q15287 305 aaKnown RBP10.15□□□□□ -0.79
UBE3D-206ENST00000505226 IGFBP7Q16270 282 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 RPS19BP1Q86WX3 136 aaKnown RBP10.15□□□□□ -0.79
UBE3D-206ENST00000505226 OR51H1Q8NH63 302 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 CA5BP1Q8WTZ4 195 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 ZNF488Q96MN9 340 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 FAM86C1Q9NVL1 165 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 ZNF391Q9UJN7 358 aa10.15□□□□□ -0.79
UBE3D-206ENST00000505226 ZNF503-AS2A6NEH8 195 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 OR5H1A6NKK0 313 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 H0Y980 276 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 PSG2P11465 335 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 MMP9P14780 707 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 NKX6-1P78426 367 aaPredicted RBP10.14□□□□□ -0.79
UBE3D-206ENST00000505226 TLE1Q04724 770 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 FOXO1Q12778 655 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 COLCA1Q6ZS62 124 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 OR10D3Q8NH80 312 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 PRO1933Q9H354 126 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 OR14J1Q9UGF5 321 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 ARHGAP21Q5T5U3 1957 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 SYNGR1O43759 233 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 CCNOP22674 350 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 F2RP25116 425 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 RND2P52198 227 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 FOXG1P55316 489 aaPredicted RBP10.14□□□□□ -0.79
UBE3D-206ENST00000505226 FGF12P61328 243 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 PRDX4Q13162 271 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 C9orf135Q5VTT2 229 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 OR10G4Q8NGN3 311 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 ADGRG7Q96K78 797 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 PRRG4Q9BZD6 226 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 WDR54Q9H977 334 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 ATP23Q9Y6H3 246 aa10.14□□□□□ -0.79
UBE3D-206ENST00000505226 IGLV2-14P01704 120 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 BCL2P10415 239 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 MLF1P58340 268 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 WIPI1Q5MNZ9 446 aaPredicted RBP10.13□□□□□ -0.79
UBE3D-206ENST00000505226 ZNF324BQ6AW86 544 aaPredicted RBP10.13□□□□□ -0.79
UBE3D-206ENST00000505226 OR13D1Q8NGV5 346 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 SNX22Q96L94 193 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 SMOC1Q9H4F8 434 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 CISD1Q9NZ45 108 aaKnown RBP10.13□□□□□ -0.79
UBE3D-206ENST00000505226 DUXBA0A1W2PPF3 345 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 ARGFXA6NJG6 315 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 PTBP3O95758 552 aaKnown RBP10.13□□□□□ -0.79
UBE3D-206ENST00000505226 HBE1P02100 147 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 METTL15P1P0C7V9 234 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 IAPPP10997 89 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 CCL4P13236 92 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 EPHA8P29322 1005 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms