RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 HOXA4Q00056 320 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-220ENST00000505005 FABP5Q01469 135 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 DYNC1I2Q13409 638 aaKnown RBP8.05□□□□□ -1.12
NR1I3-220ENST00000505005 ZNF273Q14593 569 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 LRRC75BQ2VPJ9 315 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 DEFB112Q30KQ8 113 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 PIGYQ3MUY2 71 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 CRIP3Q6Q6R5 217 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 C12orf54Q6X4T0 127 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 BRD3OSQ6XYD6 125 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 C16orf82Q7Z2V1 217 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 BATF2Q8N1L9 274 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 ABHD12Q8N2K0 398 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 PNKDQ8N490 385 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 OR10K1Q8NGX5 313 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 OR4F5Q8NH21 305 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 CAPSLQ8WWF8 208 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 C22orf15Q8WYQ4 148 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 C19orf24Q9BVV8 132 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 BEX1Q9HBH7 125 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 ZNRD1Q9P1U0 126 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 DPM3Q9P2X0 92 aa8.05□□□□□ -1.12
NR1I3-220ENST00000505005 IGHV2-26A0A0B4J1V2 119 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 DNAJC9-AS1A6NH13 148 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 IFITM5A6NNB3 132 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 NOTOA8MTQ0 251 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 TMEM14DPA8MWL7 114 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 NPIPB11E5RHQ5 1161 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 HOXA3O43365 443 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-220ENST00000505005 FCN3O75636 299 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 MELTFP08582 738 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 HKR1P10072 659 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 CCL3L1P16619 93 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 GLIPR1P48060 266 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 SERPINB10P48595 397 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 RAB7AP51149 207 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 DLX6P56179 175 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 PITPNAQ00169 270 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 ATXN7L3Q14CW9 347 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-220ENST00000505005 SLC9A3R2Q15599 337 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 LY6G6FQ5SQ64 297 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 RSBN1Q5VWQ0 802 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-220ENST00000505005 ZNF497Q6ZNH5 498 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 GAPTQ8N292 157 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 FAM89BQ8N5H3 189 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 C11orf42Q8N5U0 333 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 ZDHHC22Q8N966 263 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 NDNFQ8TB73 568 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 FAM3DQ96BQ1 224 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 AJUBAQ96IF1 538 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 RANBP3Q9H6Z4 567 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-220ENST00000505005 CALYQ9NYX4 217 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 IDI2-AS1Q9NZ38 188 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 CCDC59Q9P031 241 aaKnown RBP8.04□□□□□ -1.12
NR1I3-220ENST00000505005 KIF25Q9UIL4 384 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 VPREB3Q9UKI3 123 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 AK6Q9Y3D8 172 aaKnown RBP8.04□□□□□ -1.12
NR1I3-220ENST00000505005 MMP24Q9Y5R2 645 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 MXRA5Q9NR99 2828 aa8.04□□□□□ -1.12
NR1I3-220ENST00000505005 A0A0A6YYH2 397 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 A0A0U1RQK1 487 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 A6NJ64 397 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 ODF3BA8MYP8 253 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 M0QZK8 103 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 NDUFA7O95182 113 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 DIRAS3O95661 229 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 MT-ND4P03905 459 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 VSIG8P0DPA2 414 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 CALCBP10092 127 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 BLVRBP30043 206 aaPredicted RBP8.03□□□□□ -1.12
NR1I3-220ENST00000505005 RBMXP38159 391 aaKnown RBP8.03□□□□□ -1.12
NR1I3-220ENST00000505005 HTD2P86397 168 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 HNRNPA0Q13151 305 aaKnown RBP8.03□□□□□ -1.12
NR1I3-220ENST00000505005 C2orf76Q3KRA6 126 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 LINC01559Q495D7 138 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 Q6ZTK2 550 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 ARL11Q969Q4 196 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 FAM46BQ96A09 425 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 GALMQ96C23 342 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 SSX3Q99909 188 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 NAA50Q9GZZ1 169 aaKnown RBP8.03□□□□□ -1.12
NR1I3-220ENST00000505005 TXNL4BQ9NX01 149 aaKnown RBP8.03□□□□□ -1.12
NR1I3-220ENST00000505005 IL36RNQ9UBH0 155 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 ETV7Q9Y603 341 aa8.03□□□□□ -1.12
NR1I3-220ENST00000505005 KIAA2026Q5HYC2 2103 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 IGHV3OR16-10A0A075B7F0 116 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 TRBV6-6A0A0A6YYG2 114 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 SERPINE3A8MV23 424 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 FAM106CPP0CH98 169 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 CGB3P0DN86 165 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 CGB7P0DN87 165 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 COX7A1P24310 79 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 KIR2DS4P43632 304 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 MADCAM1Q13477 382 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 KIR2DS1Q14954 304 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 SRSF7Q16629 238 aaKnown RBP eCLIP8.02□□□□□ -1.13
NR1I3-220ENST00000505005 KRTAP24-1Q3LI83 254 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 DHRS7BQ6IAN0 325 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-220ENST00000505005 C22orf42Q6IC83 251 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 ZNF782Q6ZMW2 699 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms