RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ZMYND19Q96E35 227 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 YPEL4Q96NS1 127 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 TBX5Q99593 518 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ATP5SQ99766 215 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 RSRP1Q9BUV0 290 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 TMEM59Q9BXS4 323 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SDF2L1Q9HCN8 221 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 MANBALQ9NQG1 85 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 FAM206AQ9NX38 181 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 COPS7AQ9UBW8 275 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 RABAC1Q9UI14 185 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 COX11Q9Y6N1 276 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 COLEC10Q9Y6Z7 277 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ANKUB1A6NFN9 424 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 H0YIZ8 118 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 OR7C2O60412 319 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 LEFTY1O75610 366 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 C1QL1O75973 258 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF735P0CB33 412 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 CRISP2P16562 243 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 AKR1C4P17516 323 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ACVRL1P37023 503 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 NKX2-1P43699 371 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 DGKEP52429 567 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ELLP55199 621 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 RND3P61587 244 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 FMODQ06828 376 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 SCGB2A2Q13296 93 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 PMS2CLQ68D20 193 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 C17orf78Q8N4C9 275 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 SIGLECL1Q8N7X8 197 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 LHX4Q969G2 390 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 NEIL1Q96FI4 390 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 REEP6Q96HR9 211 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 PGAM5Q96HS1 289 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 LPAR4Q99677 370 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 OR10A5Q9H207 317 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 NKX2-4Q9H2Z4 354 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 PLEKHF2Q9H8W4 249 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ST20Q9HBF5 79 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 CISD1Q9NZ45 108 aaKnown RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 KCNIP1Q9NZI2 227 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 TAAR2Q9P1P5 351 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 PPP1R3CQ9UQK1 317 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.41□□□□□ -2.026e-7■■■□□ 15.2
NEDD4-204ENST00000503468 NSG1A0A0A6YYJ2 146 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 AHRRA9YTQ3 701 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 FAM227AF5H4B4 570 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF264O43296 627 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 S1PR2O95136 353 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 MT-ATP6P00846 226 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 IGHG1P01857 330 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 HLA-DQA1P01909 254 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 LCATP04180 440 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 OR5AL1P0C617 328 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ZGLP1P0C6A0 271 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 STAG3L2P0CL84 134 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF823P16415 610 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 GUCA1AP43080 201 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 NCBP2P52298 156 aaKnown RBP eCLIP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 TCL1AP56279 114 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 DCAF7P61962 342 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 GPR18Q14330 331 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF343Q6P1L6 599 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 IL22RA1Q8N6P7 574 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 NUP43Q8NFH3 380 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 OR52E2Q8NGJ4 325 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 HAS2Q92819 552 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 CSTL1Q9H114 145 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 RIMS4Q9H426 269 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ISG20L2Q9H9L3 353 aaKnown RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 AURKAIP1Q9NWT8 199 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 B3GAT1Q9P2W7 334 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 PSG11Q9UQ72 335 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 IGKV1D-42A0A075B6H8 117 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 M0R1X1 148 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 DEDDO75618 318 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 F12P00748 615 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 C1QCP02747 245 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 SLC6A8P48029 635 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 CASP9P55211 416 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 CLDN18P56856 261 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 HERV-K104P61576 105 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 TAF10Q12962 218 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 PRSS8Q16651 343 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF260Q3ZCT1 412 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 FBLN7Q53RD9 439 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 GLYATL3Q5SZD4 288 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF776Q68DI1 518 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 SLC48A1Q6P1K1 146 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 BOLLQ8N9W6 283 aaKnown RBP2.41□□□□□ -2.02
NEDD4-204ENST00000503468 TSTD1Q8NFU3 115 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 OR52R1Q8NGF1 315 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 OR6N2Q8NGY6 317 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 SAP25Q8TEE9 199 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 ABHD5Q8WTS1 349 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 PP6455Q8WZ26 134 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 CLUHP3Q96NS8 147 aa2.41□□□□□ -2.02
NEDD4-204ENST00000503468 G6PC3Q9BUM1 346 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms