RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 FAM219AQ8IW50 185 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 LINC00470Q9BZP3 86 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 SMDT1Q9H4I9 107 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 FBLN5Q9UBX5 448 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 CLDN34H7C241 214 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 PSG2P11465 335 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 GFRALQ6UXV0 394 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 PKIBQ9C010 78 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 KLK10O43240 276 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 DEFA4P12838 97 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 TNFAIP6P98066 277 aaPredicted RBP9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 ZNF90Q03938 601 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 CBLN2Q8IUK8 224 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 IMMP1LQ96LU5 166 aa9.32□□□□□ -0.92
LIMCH1-205ENST00000503057 HELZP42694 1942 aaKnown RBP9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 A0A1B0GTI1 187 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 NDUFB3O43676 98 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 UCP3P55916 312 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 TMEM241Q24JQ0 296 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 UBAC2Q8NBM4 344 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 OR10G4Q8NGN3 311 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 OR10G9Q8NGN4 311 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 OR10G7Q8NGN6 311 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 ADTRPQ96IZ2 230 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 MANBALQ9NQG1 85 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 LIPGQ9Y5X9 500 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 LOC102723996A0A087X1L8 192 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 SYNGR3O43761 229 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 SOX15O60248 233 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 ZIC3O60481 467 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 BTNL3Q6UXE8 466 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 FAM24BQ8N5W8 94 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 POC1AQ8NBT0 407 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 OR1K1Q8NGR3 316 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 NEIL1Q96FI4 390 aaPredicted RBP9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 OR2J1Q9GZK6 312 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 A0A087WV48 116 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 AGFG2O95081 481 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 GZMHP20718 246 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 TIGITQ495A1 244 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 ASPHD2Q6ICH7 369 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 TMEM108Q6UXF1 575 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 C17orf78Q8N4C9 275 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 KDF1Q8NAX2 398 aaPredicted RBP9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 MRGPRFQ96AM1 343 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 R3HDM4Q96D70 268 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 HSD17B10Q99714 261 aaKnown RBP9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 NRIP2Q9BQI9 281 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 GAL3ST2Q9H3Q3 398 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 FKBP11Q9NYL4 201 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 OR7C2O60412 319 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 NQO2P16083 231 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 F2RP25116 425 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 HOXD11P31277 338 aaPredicted RBP9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 UBE2G2P60604 165 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 ZNF528Q3MIS6 628 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 NRN1LQ496H8 165 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 CMTM2Q8TAZ6 248 aa9.31□□□□□ -0.92
LIMCH1-205ENST00000503057 B4DEV8 164 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 ADH4P08319 380 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 CDC34P49427 236 aaPredicted RBP9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 UBE2G1P62253 170 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 PDZD11Q5EBL8 140 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 OR4S2Q8NH73 311 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 ZNF488Q96MN9 340 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 TUBG2Q9NRH3 451 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 CDRT15L2A8MXV6 281 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 CNIH1O95406 144 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 SPINK2P20155 84 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 CCL1P22362 96 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 ATP6V0CP27449 155 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 CFHR1Q03591 330 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 LYG1Q8N1E2 194 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 NPAS1Q99742 590 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 GAR1Q9NY12 217 aaKnown RBP9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 K7EQM0 130 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 K7ESF4 209 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 ZNF883P0CG24 379 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 NHLH2Q02577 135 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 DTD1Q8TEA8 209 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 MRPS18CQ9Y3D5 142 aaKnown RBP9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 NUP210Q8TEM1 1887 aaPredicted RBP9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 PLXNB3Q9ULL4 1909 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 hADV38S2A0JD32 116 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 SCTP09683 121 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 MUC1P15941 1255 aaPredicted RBP9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 HLA-GP17693 338 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 ARL3P36405 182 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 SNRPEP62304 92 aaKnown RBP9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 TMEM187Q14656 261 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 ETV3LQ6ZN32 361 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 PLPPR2Q96GM1 343 aa9.3□□□□□ -0.92
LIMCH1-205ENST00000503057 A0A1W2PPQ1 181 aa9.29□□□□□ -0.92
LIMCH1-205ENST00000503057 MPZP25189 248 aa9.29□□□□□ -0.92
LIMCH1-205ENST00000503057 UCP2P55851 309 aa9.29□□□□□ -0.92
LIMCH1-205ENST00000503057 SHISA5Q8N114 240 aa9.29□□□□□ -0.92
LIMCH1-205ENST00000503057 Q9N2K0 584 aa9.29□□□□□ -0.92
LIMCH1-205ENST00000503057 C7orf77A4D0Y5 90 aa9.29□□□□□ -0.92
LIMCH1-205ENST00000503057 GNG10P50151 68 aa9.29□□□□□ -0.92
LIMCH1-205ENST00000503057 LGALS4P56470 323 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms