RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 BAXQ07812 192 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 HERPUD1Q15011 391 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 GUSBP1Q15486 140 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 HMGN3Q15651 99 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 MST1LQ2TV78 715 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 ZNF818PQ6ZRF7 136 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 SELENOHQ8IZQ5 122 aaKnown RBP10.2□□□□□ -0.78
NUP54-202ENST00000502850 C17orf78Q8N4C9 275 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 OR52M1Q8NGK5 317 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 WNT2BQ93097 391 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 AKR1E2Q96JD6 320 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 TRIB1Q96RU8 372 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 MS4A7Q9GZW8 240 aaPredicted RBP10.2□□□□□ -0.78
NUP54-202ENST00000502850 ASCL3Q9NQ33 180 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 FREM2Q5SZK8 3169 aa10.2□□□□□ -0.78
NUP54-202ENST00000502850 HSPB6O14558 160 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 PITX3O75364 302 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 PGA5P0DJD9 388 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 CBR1P16152 277 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 ATF4P18848 351 aaPredicted RBP10.19□□□□□ -0.78
NUP54-202ENST00000502850 COX5AP20674 150 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 IDH3GP51553 393 aaPredicted RBP10.19□□□□□ -0.78
NUP54-202ENST00000502850 CCL11P51671 97 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 ZNF146Q15072 292 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 BTNL8Q6UX41 500 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 Q6ZRG5 221 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 FAM219AQ8IW50 185 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 H1FOOQ8IZA3 346 aaPredicted RBP10.19□□□□□ -0.78
NUP54-202ENST00000502850 OR2C3Q8N628 320 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 FDCSPQ8NFU4 85 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 OR51B6Q9H340 312 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 HRH4Q9H3N8 390 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 UQCC1Q9NVA1 299 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 IL36RNQ9UBH0 155 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 DSPP15924 2871 aaKnown RBP10.19□□□□□ -0.78
NUP54-202ENST00000502850 ASPMQ8IZT6 3477 aa10.19□□□□□ -0.78
NUP54-202ENST00000502850 NKX2-6A6NCS4 301 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 ZNF891A8MT65 544 aaPredicted RBP10.18□□□□□ -0.78
NUP54-202ENST00000502850 TRIM77I1YAP6 450 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 WRBO00258 174 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 HSD17B6O14756 317 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 HS3ST1O14792 307 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 SH2D1BO14796 132 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 SPP1P10451 314 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 LPAR6P43657 344 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 UCP2P55851 309 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 ERVK11-1P61568 191 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 PMP22Q01453 160 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 MZT1Q08AG7 82 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 OR8G1Q15617 311 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 SPATA46Q5T0L3 261 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 ZNF324BQ6AW86 544 aaPredicted RBP10.18□□□□□ -0.78
NUP54-202ENST00000502850 Q6P435 159 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 PCSK4Q6UW60 755 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 VASH2Q86V25 355 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 SCCPDHQ8NBX0 429 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 LFNGQ8NES3 379 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 DMBX1Q8NFW5 382 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 OR1J1Q8NGS3 322 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 LYPD6BQ8NI32 183 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 RDH5Q92781 318 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 ERGIC1Q969X5 290 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 HS3ST6Q96QI5 342 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 NRIP2Q9BQI9 281 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 SMIM3Q9BZL3 60 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 OR2J1Q9GZK6 312 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 PLEKHF2Q9H8W4 249 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 LYRM2Q9NU23 88 aaPredicted RBP10.18□□□□□ -0.78
NUP54-202ENST00000502850 CACNA1GO43497 2377 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 WDFY3Q8IZQ1 3526 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 MED12LQ86YW9 2145 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 IGKV1-6A0A0C4DH72 117 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 RNF212BA8MTL3 300 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 AHRRA9YTQ3 701 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 NKX2-8O15522 239 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 HSPA12AO43301 675 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 LILRA1O75019 489 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 FBXO24O75426 580 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 NXPH2O95156 264 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 IGKV3-15P01624 115 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 DANCRP0C864 163 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 F2RP25116 425 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 CD200P41217 278 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 DVL1P1P54792 670 aaPredicted RBP10.18□□□□□ -0.78
NUP54-202ENST00000502850 EWSR1Q01844 656 aaKnown RBP eCLIP10.18□□□□□ -0.78
NUP54-202ENST00000502850 NMSQ5H8A3 153 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 ZNF497Q6ZNH5 498 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 BOLLQ8N9W6 283 aaKnown RBP10.18□□□□□ -0.78
NUP54-202ENST00000502850 CLRN3Q8NCR9 226 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 OR10V1Q8NGI7 309 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 LILRB1Q8NHL6 650 aaPredicted RBP10.18□□□□□ -0.78
NUP54-202ENST00000502850 SLC25A40Q8TBP6 338 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 ZNF488Q96MN9 340 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 USB1Q9BQ65 265 aaKnown RBP10.18□□□□□ -0.78
NUP54-202ENST00000502850 CCL28Q9NRJ3 127 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 LIN7CQ9NUP9 197 aaKnown RBP10.18□□□□□ -0.78
NUP54-202ENST00000502850 TAAR3PQ9P1P4 343 aa10.18□□□□□ -0.78
NUP54-202ENST00000502850 IGKV1D-13A0A0B4J2D9 117 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 A0A1B0GU03 582 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 UMAD1C9J7I0 102 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms