RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 ATP5F1P24539 256 aaPredicted RBP3.08□□□□□ -1.92
CSTF1-207ENST00000498689 HTR1FP30939 366 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 SNU13P55769 128 aaKnown RBP3.08□□□□□ -1.92
CSTF1-207ENST00000498689 LRRC74AQ0VAA2 488 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 EXOSC2Q13868 293 aaKnown RBP3.08□□□□□ -1.92
CSTF1-207ENST00000498689 CEACAM21Q3KPI0 293 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 LEMD1Q68G75 181 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 UNQ9165/PRO28630Q6UXU0 137 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 SLC16A12Q6ZSM3 486 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 CYS1Q717R9 158 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 FAM57BQ71RH2 274 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 PRSS45Q7RTY3 260 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 FAM122BQ7Z309 247 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 SMYD1Q8NB12 490 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 BBS1Q8NFJ9 593 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 OR51A7Q8NH64 312 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 NTN5Q8WTR8 489 aaPredicted RBP3.08□□□□□ -1.92
CSTF1-207ENST00000498689 THRSPQ92748 146 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 FAM46BQ96A09 425 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 KCNJ15Q99712 375 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 ZNF251Q9BRH9 671 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 CACYBPQ9HB71 228 aaKnown RBP3.08□□□□□ -1.92
CSTF1-207ENST00000498689 BCL2L10Q9HD36 194 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 MRPL22Q9NWU5 206 aaKnown RBP3.08□□□□□ -1.92
CSTF1-207ENST00000498689 IDI2-AS1Q9NZ38 188 aa3.08□□□□□ -1.92
CSTF1-207ENST00000498689 ZNF230Q9UIE0 474 aaPredicted RBP3.08□□□□□ -1.92
CSTF1-207ENST00000498689 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.07□□□□□ -1.92
CSTF1-207ENST00000498689 TRAV39A0A0B4J263 110 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 A0A0J9YXV3 536 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 A8MWP6 167 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 B2RBV5 119 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 J3QT63 122 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 PRH1P02810 166 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 APELAP0DMC3 54 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 C21orf33P30042 268 aaPredicted RBP3.07□□□□□ -1.92
CSTF1-207ENST00000498689 RPS19P39019 145 aaKnown RBP3.07□□□□□ -1.92
CSTF1-207ENST00000498689 CDKN2AP42771 156 aaKnown RBP3.07□□□□□ -1.92
CSTF1-207ENST00000498689 CX3CR1P49238 355 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 SSBP2P81877 361 aaPredicted RBP3.07□□□□□ -1.92
CSTF1-207ENST00000498689 CLINT1Q14677 625 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 ESRGQ1W209 222 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 KANK2Q63ZY3 851 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 MOB3CQ70IA8 216 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 TCEANCQ8N8B7 351 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 FNDC5Q8NAU1 212 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 ADAD2Q8NCV1 583 aaKnown RBP3.07□□□□□ -1.92
CSTF1-207ENST00000498689 NPBQ8NG41 125 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 GRPEL2Q8TAA5 225 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 TSPEARQ8WU66 669 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 TWIST2Q8WVJ9 160 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 RASSF5Q8WWW0 418 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.07□□□□□ -1.92
CSTF1-207ENST00000498689 PKNOX2Q96KN3 472 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 ZNF570Q96NI8 536 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 HIST1H2AAQ96QV6 131 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 UPK3BQ9BT76 320 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 COPS4Q9BT78 406 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 DPH3P1Q9H4G8 78 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 C5orf66Q9H5L9 145 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 AKIP1Q9NQ31 210 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 SLC2A9Q9NRM0 540 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 TMEM14BQ9NUH8 114 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 CALYQ9NYX4 217 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 MTCH1Q9NZJ7 389 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 DNAJC27Q9NZQ0 273 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 GRHPRQ9UBQ7 328 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 RNF150Q9ULK6 438 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 CORO2BQ9UQ03 480 aa3.07□□□□□ -1.92
CSTF1-207ENST00000498689 H3BUA1 57 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 ZNF593O00488 134 aaPredicted RBP3.06□□□□□ -1.92
CSTF1-207ENST00000498689 XKRYO14609 159 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 SOCS1O15524 211 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 SEC31AO94979 1220 aaKnown RBP3.06□□□□□ -1.92
CSTF1-207ENST00000498689 CA2P00918 260 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 IGHV3-23P01764 117 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 REG1AP05451 166 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 CRYGCP07315 174 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 TPM1P09493 284 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 GLP1RP43220 463 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 CRISP1P54107 249 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 GRB2P62993 217 aaKnown RBP3.06□□□□□ -1.92
CSTF1-207ENST00000498689 TXNL4AP83876 142 aaKnown RBP3.06□□□□□ -1.92
CSTF1-207ENST00000498689 ZNF91Q05481 1191 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 KRR1Q13601 381 aaKnown RBP3.06□□□□□ -1.92
CSTF1-207ENST00000498689 ATXN7L3Q14CW9 347 aaPredicted RBP3.06□□□□□ -1.92
CSTF1-207ENST00000498689 PTGES3Q15185 160 aaKnown RBP3.06□□□□□ -1.92
CSTF1-207ENST00000498689 ANXA8L1Q5VT79 327 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 Q8N814 137 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 DRAXINQ8NBI3 349 aaPredicted RBP3.06□□□□□ -1.92
CSTF1-207ENST00000498689 DNAAF1Q8NEP3 725 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 OR5A2Q8NGI9 324 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 OR13C2Q8NGS9 318 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 SLAMF9Q96A28 289 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 PPP3R2Q96LZ3 170 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 PANX1Q96RD7 426 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 FUZQ9BT04 418 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 NSRP1Q9H0G5 558 aaKnown RBP3.06□□□□□ -1.92
CSTF1-207ENST00000498689 CDIP1Q9H305 208 aa3.06□□□□□ -1.92
CSTF1-207ENST00000498689 NMNAT1Q9HAN9 279 aaPredicted RBP3.06□□□□□ -1.92
CSTF1-207ENST00000498689 ABCB9Q9NP78 766 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms