RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 MICU1Q9BPX6 476 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 SPIN2BQ9BPZ2 258 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 AIF1LQ9BQI0 150 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 SEC22CQ9BRL7 303 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 GINS4Q9BRT9 223 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 C2orf88Q9BSF0 95 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 COPS4Q9BT78 406 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 DCUN1D5Q9BTE7 237 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 THTPAQ9BU02 230 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 SLC25A2Q9BXI2 301 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 ZNF436Q9C0F3 470 aaPredicted RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 DERL2Q9GZP9 239 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 NXF2Q9GZY0 626 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 ILKAPQ9H0C8 392 aaPredicted RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 SPNS1Q9H2V7 528 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 ARMC7Q9H6L4 198 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 ASCL3Q9NQ33 180 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 DYRK4Q9NR20 520 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 AGPAT3Q9NRZ7 376 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 SDHAF2Q9NX18 166 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 COA4Q9NYJ1 87 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 TAS2R9Q9NYW1 312 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 GCNT4Q9P109 453 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 MYEF2Q9P2K5 600 aaKnown RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 CTSFQ9UBX1 484 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 OR12D3Q9UGF7 316 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 FBXO5Q9UKT4 447 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 PSG8Q9UQ74 426 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 PCYT1BQ9Y5K3 369 aaPredicted RBP1.59□□□□□ -2.15
CBX3-208ENST00000497498 ALG5Q9Y673 324 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 HSPE1-MOB4S4R3N1 261 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 PTPRFP10586 1907 aa1.59□□□□□ -2.15
CBX3-208ENST00000497498 DOCK2Q92608 1830 aa1.59□□□□□ -2.16
CBX3-208ENST00000497498 MYH8P13535 1937 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 PTPRSQ13332 1948 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 ATG2AQ2TAZ0 1938 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 MYH4Q9Y623 1939 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 HERC1Q15751 4861 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 A0A0G2JND7 137 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 A0A0J9YYE9 177 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 EXOC1LA0A1B0GW35 172 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 TRAPPC13A5PLN9 417 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 C1orf196B1AJZ1 125 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 LINC00587B1AMM8 73 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 C9JVG2 144 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 C5orf67F2Z3F1 127 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 J3QRK9 145 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 M0QZ92 97 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 COPEO14579 308 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 GPR171O14626 319 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 TCAPO15273 167 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 FADS1O60427 444 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 UGT2B11O75310 529 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 SRP72O76094 671 aaKnown RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 C6orf47O95873 294 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 IFNA17P01571 189 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 TRBC1P01850 177 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 CRYGBP07316 175 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 OR56A5P0C7T3 313 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 METTL15P1P0C7V9 234 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 STAG3L3P0CL85 134 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 OR5H8P0DN80 308 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 PGAM1P18669 254 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 PVALBP20472 110 aaPredicted RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 ME2P23368 584 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 DTYMKP23919 212 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 TEAD1P28347 426 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 CCR7P32248 378 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 RFC3P40938 356 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 AQP2P41181 271 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 RPL35P42766 123 aaKnown RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 SLC1A2P43004 574 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 MAGEA3P43357 314 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 CSNK1A1P48729 337 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 CSNK1EP49674 416 aaKnown RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 IDH3GP51553 393 aaPredicted RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 ZNF138P52744 262 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 PRRX1P54821 245 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 AQP5P55064 265 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 DYNLL1P63167 89 aaKnown RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 GNA12Q03113 381 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 MGAT3Q09327 533 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 TCP10Q12799 353 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 ILKQ13418 452 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 PNOCQ13519 176 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 IL18Q14116 193 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 TFDP2Q14188 446 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 QPRTQ15274 297 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 PSMD5Q16401 504 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 HSDL1Q3SXM5 330 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 KRTAP13-2Q52LG2 175 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 COQ5Q5HYK3 327 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 PABPC1L2AQ5JQF8 200 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 AVPI1Q5T686 147 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 MLIPQ5VWP3 458 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 RAET1LQ5VY80 246 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 ANKRD22Q5VYY1 191 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 EIF5AL1Q6IS14 154 aaKnown RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 SLC25A25Q6KCM7 469 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 REEP3Q6NUK4 255 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms