RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 FOXL1Q12952 345 aa7.85□□□□□ -1.15
HPS4-217ENST00000496385 PINX1Q96BK5 328 aaKnown RBP7.85□□□□□ -1.15
HPS4-217ENST00000496385 RPUSD4Q96CM3 377 aaKnown RBP7.85□□□□□ -1.15
HPS4-217ENST00000496385 SLAMF6Q96DU3 332 aa7.85□□□□□ -1.15
HPS4-217ENST00000496385 SLC46A1Q96NT5 459 aa7.85□□□□□ -1.15
HPS4-217ENST00000496385 MANBALQ9NQG1 85 aa7.85□□□□□ -1.15
HPS4-217ENST00000496385 MRPL27Q9P0M9 148 aaKnown RBP7.85□□□□□ -1.15
HPS4-217ENST00000496385 ANXA10Q9UJ72 324 aa7.85□□□□□ -1.15
HPS4-217ENST00000496385 CEBPZOSA8MTT3 80 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 K7ERU9 68 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 ATXN7O15265 892 aaPredicted RBP7.84□□□□□ -1.15
HPS4-217ENST00000496385 NBEAP1P0C6P0 100 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 AADACP22760 399 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 TNFSF4P23510 183 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 NBL1P41271 181 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 NPBWR2P48146 333 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 HNRNPA3P51991 378 aaKnown RBP7.84□□□□□ -1.15
HPS4-217ENST00000496385 ZNF133P52736 654 aaPredicted RBP7.84□□□□□ -1.15
HPS4-217ENST00000496385 SUMO1P63165 101 aaKnown RBP7.84□□□□□ -1.15
HPS4-217ENST00000496385 OCIAD2Q56VL3 154 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 TRIM61Q5EBN2 209 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 CST9LP1Q5W188 147 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 C1orf174Q8IYL3 243 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 OR5AS1Q8N127 324 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 TMEM256Q8N2U0 113 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 NECAP1Q8NC96 275 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 CADM4Q8NFZ8 388 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 SSC4DQ8WTU2 575 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 VSTM2LQ96N03 204 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 TIMM29Q9BSF4 260 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 ZNF665Q9H7R5 613 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 CHODLQ9H9P2 273 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 PILRBQ9UKJ0 227 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 RNF115Q9Y4L5 304 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 CABIN1Q9Y6J0 2220 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 TRAV36DV7A0A075B6V5 113 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 PIGBOS1A0A0B4J2F0 54 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 ANKUB1A6NFN9 424 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 CTLA4P16410 223 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 CD27P26842 260 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 BLVRBP30043 206 aaPredicted RBP7.84□□□□□ -1.15
HPS4-217ENST00000496385 MEF2BQ02080 365 aaPredicted RBP7.84□□□□□ -1.15
HPS4-217ENST00000496385 ID2Q02363 134 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 ACKR1Q16570 336 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 DEFB134Q4QY38 66 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 TMPRSS7Q7RTY8 843 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 TMEM144Q7Z5S9 345 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 SLC38A9Q8NBW4 561 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 OR13H1Q8NG92 308 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 PBOV1Q9GZY1 135 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 BANF2Q9H503 90 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 SLC35D1Q9NTN3 355 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 ZNF701Q9NV72 531 aaPredicted RBP7.84□□□□□ -1.15
HPS4-217ENST00000496385 SH3BGRL2Q9UJC5 107 aa7.84□□□□□ -1.15
HPS4-217ENST00000496385 TRAV9-1A0A075B6T8 112 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 GDF9O60383 454 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 IGLC2P0DOY2 106 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 IGLC3P0DOY3 106 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 HNRNPA2B1P22626 353 aaKnown RBP7.83□□□□□ -1.16
HPS4-217ENST00000496385 PEBP1P30086 187 aaKnown RBP7.83□□□□□ -1.16
HPS4-217ENST00000496385 SLC6A8P48029 635 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 TDRG1Q3Y452 100 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 FNDC7Q5VTL7 733 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 OGFOD3Q6PK18 319 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 RD3Q7Z3Z2 195 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 TCTEX1D1Q8N7M0 179 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 BMFQ96LC9 184 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 ADOQ96SZ5 270 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 TXN2Q99757 166 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 ZNF703Q9H7S9 590 aaPredicted RBP7.83□□□□□ -1.16
HPS4-217ENST00000496385 HEBP2Q9Y5Z4 205 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 RFNGQ9Y644 331 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 TNRC6BQ9UPQ9 1833 aaKnown RBP7.83□□□□□ -1.16
HPS4-217ENST00000496385 CACNA1EQ15878 2313 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 REG1AP05451 166 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 OR3A4PP47883 348 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 COMPP49747 757 aaPredicted RBP7.83□□□□□ -1.16
HPS4-217ENST00000496385 ASCL1P50553 236 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 CCR5P51681 352 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 ID3Q02535 119 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 MSMO1Q15800 293 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 SP6Q3SY56 376 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 PET117Q6UWS5 81 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 Q6ZSR6 202 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 ZNF321PQ8N8H1 164 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 OR4N2Q8NGD1 307 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 VN1R17PQ8TDU5 208 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 CCDC3Q9BQI4 270 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 CST9LQ9H4G1 147 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 RPRMQ9NS64 109 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 CACNA1CQ13936 2221 aa7.83□□□□□ -1.16
HPS4-217ENST00000496385 HS3ST1O14792 307 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 ZNF737O75373 536 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 DXOO77932 396 aaKnown RBP7.82□□□□□ -1.16
HPS4-217ENST00000496385 IL3RAP26951 378 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 CD38P28907 300 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 GCH1P30793 250 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 EFNA3P52797 238 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 RUNX1Q01196 453 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 Q0VG73 95 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms