RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 MRPS24Q96EL2 167 aaKnown RBP9.47□□□□□ -0.89
THBS3-208ENST00000496332 AKR1E2Q96JD6 320 aa9.47□□□□□ -0.89
THBS3-208ENST00000496332 SLC25A33Q9BSK2 321 aa9.47□□□□□ -0.89
THBS3-208ENST00000496332 TMED9Q9BVK6 235 aa9.47□□□□□ -0.89
THBS3-208ENST00000496332 WNT10AQ9GZT5 417 aa9.47□□□□□ -0.89
THBS3-208ENST00000496332 BANF2Q9H503 90 aa9.47□□□□□ -0.89
THBS3-208ENST00000496332 SPACA1Q9HBV2 294 aa9.47□□□□□ -0.89
THBS3-208ENST00000496332 LSM2Q9Y333 95 aaKnown RBP9.47□□□□□ -0.89
THBS3-208ENST00000496332 AMMECR1Q9Y4X0 333 aaPredicted RBP9.47□□□□□ -0.89
THBS3-208ENST00000496332 A0A1W2PPE3 182 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 MCRIP1C9JLW8 97 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 FBXO24O75426 580 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 CRTAPO75718 401 aaPredicted RBP9.46□□□□□ -0.9
THBS3-208ENST00000496332 OR2F2O95006 317 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 MGMTP16455 207 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 GP2P55259 537 aaKnown RBP9.46□□□□□ -0.9
THBS3-208ENST00000496332 MADCAM1Q13477 382 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 MED22Q15528 200 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 TMEM95Q3KNT9 176 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 RAB12Q6IQ22 244 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 UNQ9370/PRO34162Q6UXP9 181 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 LYG1Q8N1E2 194 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 NKAIN3Q8N8D7 197 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 TMEM104Q8NE00 496 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 UBALD1Q8TB05 177 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 WIPF2Q8TF74 440 aaPredicted RBP9.46□□□□□ -0.9
THBS3-208ENST00000496332 ARL11Q969Q4 196 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 RBM14Q96PK6 669 aaKnown RBP9.46□□□□□ -0.9
THBS3-208ENST00000496332 OCSTAMPQ9BR26 566 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 UQCC2Q9BRT2 126 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 SELENOIQ9C0D9 397 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 RCC2Q9P258 522 aaKnown RBP9.46□□□□□ -0.9
THBS3-208ENST00000496332 TPRKBQ9Y3C4 175 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 PEX16Q9Y5Y5 336 aa9.46□□□□□ -0.9
THBS3-208ENST00000496332 WNK1Q9H4A3 2382 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 H0YHG0 523 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 C15orf65H3BRN8 121 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 AIPO00170 330 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 SDCBPO00560 298 aaPredicted RBP9.45□□□□□ -0.9
THBS3-208ENST00000496332 ORC5O43913 435 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 FAM106CPP0CH98 169 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 MYF6P23409 242 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 VHLP40337 213 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 SLC35A2P78381 396 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 DIAPH2-AS1Q14236 149 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 IRF3Q14653 427 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 NSUN5P1Q3KNT7 163 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 ABCA11PQ4W5N1 156 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 FAM27D1Q5T7N8 215 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 CEACAM19Q7Z692 300 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 OR10X1Q8NGY0 326 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 DUSP21Q9H596 190 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 ETAA1Q9NY74 926 aa9.45□□□□□ -0.9
THBS3-208ENST00000496332 TET2Q6N021 2002 aaPredicted RBP9.44□□□□□ -0.9
THBS3-208ENST00000496332 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 A0A1W2PPI3 338 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A10PA6NDY2 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A18PA6NE21 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A16PA6NEW6 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 ERICH4A6NGS2 130 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A20PA6NIJ5 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A7PA6NKC0 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 SH2D7A6NKC9 451 aaPredicted RBP9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A9PA6NNJ1 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A12PA8MX19 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A5PA8MXJ8 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A23PA8MXZ1 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 C12orf77C9JDV5 145 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 AMY1AP04745 511 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 AMY2AP04746 511 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 LPLP06858 475 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 SNRNP70P08621 437 aaKnown RBP9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A15PP0C7V4 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A13PP0C7W8 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A14PP0C7W9 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM90A24PP0C7X0 464 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FUT3P21217 361 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 RAB7AP51149 207 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 GPR50Q13585 617 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 RBM48Q5RL73 367 aaKnown RBP9.44□□□□□ -0.9
THBS3-208ENST00000496332 SYT6Q5T7P8 510 aaPredicted RBP9.44□□□□□ -0.9
THBS3-208ENST00000496332 LIPKQ5VXJ0 399 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM53AQ6NSI3 398 aaPredicted RBP9.44□□□□□ -0.9
THBS3-208ENST00000496332 LRRTM1Q86UE6 522 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 THNSL2Q86YJ6 484 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 DRAM1Q8N682 238 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 OR52M1Q8NGK5 317 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 OR4K15Q8NH41 348 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 OR56B4Q8NH76 319 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 PHYHIPQ92561 330 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 UFD1Q92890 307 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 FAM46BQ96A09 425 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 Q96M66 194 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 CITED2Q99967 270 aaPredicted RBP9.44□□□□□ -0.9
THBS3-208ENST00000496332 ANKRD60Q9BZ19 345 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 GFOD1Q9NXC2 390 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 GHRLQ9UBU3 117 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 TRAPPC2LQ9UL33 140 aa9.44□□□□□ -0.9
THBS3-208ENST00000496332 IGHV3-43A0A0B4J1X8 118 aa9.43□□□□□ -0.9
THBS3-208ENST00000496332 UBE2QL1A1L167 161 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms