RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 C8orf31Q8N9H6 132 aa19.37■□□□□ 0.69
HLA-C-209ENST00000495835 TOMM40LQ969M1 308 aa19.37■□□□□ 0.69
HLA-C-209ENST00000495835 UQCC2Q9BRT2 126 aa19.37■□□□□ 0.69
HLA-C-209ENST00000495835 MND1Q9BWT6 205 aa19.37■□□□□ 0.69
HLA-C-209ENST00000495835 RAB9BQ9NP90 201 aa19.37■□□□□ 0.69
HLA-C-209ENST00000495835 RCC2Q9P258 522 aaKnown RBP19.37■□□□□ 0.69
HLA-C-209ENST00000495835 GHRLQ9UBU3 117 aa19.37■□□□□ 0.69
HLA-C-209ENST00000495835 MAGEA13PA6NCF6 341 aa19.36■□□□□ 0.69
HLA-C-209ENST00000495835 CDK1P06493 297 aa19.36■□□□□ 0.69
HLA-C-209ENST00000495835 SSTR5P35346 364 aa19.36■□□□□ 0.69
HLA-C-209ENST00000495835 C6orf141Q5SZD1 244 aa19.36■□□□□ 0.69
HLA-C-209ENST00000495835 ZNF497Q6ZNH5 498 aa19.36■□□□□ 0.69
HLA-C-209ENST00000495835 OR8H3Q8N146 312 aa19.36■□□□□ 0.69
HLA-C-209ENST00000495835 RFESDQ8TAC1 157 aa19.36■□□□□ 0.69
HLA-C-209ENST00000495835 MYDGFQ969H8 173 aa19.36■□□□□ 0.69
HLA-C-209ENST00000495835 MUL1Q969V5 352 aa19.36■□□□□ 0.69
HLA-C-209ENST00000495835 SCN3BQ9NY72 215 aa19.36■□□□□ 0.69
HLA-C-209ENST00000495835 PNMA8CA0A1B0GUJ8 204 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 A0A1W2PPK0 400 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 MCRIP1C9JLW8 97 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 CA11O75493 328 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 MT-ND4P03905 459 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 MAS1P04201 325 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 CD24P25063 80 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 TMEM30BQ3MIR4 351 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 UTF1Q5T230 341 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 AWAT2Q6E213 333 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 UNQ9370/PRO34162Q6UXP9 181 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 NEK7Q8TDX7 302 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 ZNF581Q9P0T4 197 aa19.35■□□□□ 0.69
HLA-C-209ENST00000495835 A0A1W2PP11 408 aa19.34■□□□□ 0.69
HLA-C-209ENST00000495835 PIN1P1O15428 100 aa19.34■□□□□ 0.69
HLA-C-209ENST00000495835 CD28P10747 220 aa19.34■□□□□ 0.69
HLA-C-209ENST00000495835 GPR50Q13585 617 aa19.34■□□□□ 0.69
HLA-C-209ENST00000495835 LINC00311Q8N616 119 aa19.34■□□□□ 0.69
HLA-C-209ENST00000495835 OR4F17Q8NGA8 305 aa19.34■□□□□ 0.69
HLA-C-209ENST00000495835 OR4F4Q96R69 305 aa19.34■□□□□ 0.69
HLA-C-209ENST00000495835 ANKRD65E5RJM6 399 aa19.33■□□□□ 0.68
HLA-C-209ENST00000495835 C15orf65H3BRN8 121 aa19.33■□□□□ 0.68
HLA-C-209ENST00000495835 GAPTQ8N292 157 aa19.33■□□□□ 0.68
HLA-C-209ENST00000495835 OR10X1Q8NGY0 326 aa19.33■□□□□ 0.68
HLA-C-209ENST00000495835 ARL11Q969Q4 196 aa19.33■□□□□ 0.68
HLA-C-209ENST00000495835 AIPO00170 330 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 AMY1AP04745 511 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 AMY2AP04746 511 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 UBBP0CG47 229 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 MGMTP16455 207 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 CD83Q01151 205 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 ZNF816Q0VGE8 651 aaPredicted RBP19.32■□□□□ 0.68
HLA-C-209ENST00000495835 SPHARQ15513 63 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 ABCA11PQ4W5N1 156 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 ACSM3Q53FZ2 586 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 TRAT1Q6PIZ9 186 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 CENPVQ7Z7K6 275 aaPredicted RBP19.32■□□□□ 0.68
HLA-C-209ENST00000495835 OR5AU1Q8NGC0 362 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 PHYHIPQ92561 330 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 LEAP2Q969E1 77 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 OR5M11Q96RB7 305 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 CITED2Q99967 270 aaPredicted RBP19.32■□□□□ 0.68
HLA-C-209ENST00000495835 NKX1-2Q9UD57 310 aaPredicted RBP19.32■□□□□ 0.68
HLA-C-209ENST00000495835 MOB4Q9Y3A3 225 aa19.32■□□□□ 0.68
HLA-C-209ENST00000495835 PLXNB1O43157 2135 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 TRAV39A0A0B4J263 110 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 A0A1W2PPI3 338 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 PTGES3LE9PB15 166 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 SC5DO75845 299 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 FUT3P21217 361 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 LTC4SQ16873 150 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 C6orf183Q5T699 404 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 RAB12Q6IQ22 244 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 Q96M66 194 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 CST11Q9H112 138 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 GFOD1Q9NXC2 390 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 ETAA1Q9NY74 926 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 TPRKBQ9Y3C4 175 aa19.31■□□□□ 0.68
HLA-C-209ENST00000495835 H0YHG0 523 aa19.3■□□□□ 0.68
HLA-C-209ENST00000495835 SDCBPO00560 298 aaPredicted RBP19.3■□□□□ 0.68
HLA-C-209ENST00000495835 SPINT2O43291 252 aa19.3■□□□□ 0.68
HLA-C-209ENST00000495835 FGF16O43320 207 aa19.3■□□□□ 0.68
HLA-C-209ENST00000495835 IGHV3-7P01780 117 aa19.3■□□□□ 0.68
HLA-C-209ENST00000495835 GAPDHP04406 335 aaKnown RBP19.3■□□□□ 0.68
HLA-C-209ENST00000495835 GNG10P50151 68 aa19.3■□□□□ 0.68
HLA-C-209ENST00000495835 LOXL3P58215 753 aa19.3■□□□□ 0.68
HLA-C-209ENST00000495835 SLC35A2P78381 396 aa19.3■□□□□ 0.68
HLA-C-209ENST00000495835 GABPB1Q06547 395 aaPredicted RBP19.3■□□□□ 0.68
HLA-C-209ENST00000495835 NSUN5P1Q3KNT7 163 aa19.3■□□□□ 0.68
HLA-C-209ENST00000495835 ZNF554Q86TJ5 538 aa19.3■□□□□ 0.68
HLA-C-209ENST00000495835 SELENOIQ9C0D9 397 aa19.3■□□□□ 0.68
HLA-C-209ENST00000495835 LSM2Q9Y333 95 aaKnown RBP19.3■□□□□ 0.68
HLA-C-209ENST00000495835 PEX16Q9Y5Y5 336 aa19.3■□□□□ 0.68
HLA-C-209ENST00000495835 ADARB2-AS1A8MUL3 147 aa19.29■□□□□ 0.68
HLA-C-209ENST00000495835 CCRL2O00421 344 aa19.29■□□□□ 0.68
HLA-C-209ENST00000495835 CRTAPO75718 401 aaPredicted RBP19.29■□□□□ 0.68
HLA-C-209ENST00000495835 LPLP06858 475 aa19.29■□□□□ 0.68
HLA-C-209ENST00000495835 SNRNP70P08621 437 aaKnown RBP19.29■□□□□ 0.68
HLA-C-209ENST00000495835 EBI3Q14213 229 aa19.29■□□□□ 0.68
HLA-C-209ENST00000495835 TMEM95Q3KNT9 176 aa19.29■□□□□ 0.68
HLA-C-209ENST00000495835 SYT6Q5T7P8 510 aaPredicted RBP19.29■□□□□ 0.68
HLA-C-209ENST00000495835 GLT8D1Q68CQ7 371 aa19.29■□□□□ 0.68
HLA-C-209ENST00000495835 DRAM1Q8N682 238 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms