RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 ZNF107Q9UII5 783 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-209ENST00000495677 MRPS28Q9Y2Q9 187 aaKnown RBP10.36□□□□□ -0.75
COL1A1-209ENST00000495677 FRAS1Q86XX4 4008 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 A0A1W2PPE3 182 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 ARPC1BO15143 372 aaKnown RBP10.35□□□□□ -0.75
COL1A1-209ENST00000495677 IL3RAP26951 378 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 SSTR5P35346 364 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 IL13RA2Q14627 380 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 HAGHQ16775 308 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 LTC4SQ16873 150 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 PAN3Q58A45 887 aaKnown RBP10.35□□□□□ -0.75
COL1A1-209ENST00000495677 GID4Q8IVV7 300 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 ADGRG5Q8IZF4 528 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 TCEANCQ8N8B7 351 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 MINDY2Q8NBR6 621 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 TMEM163Q8TC26 289 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 ASB9Q96DX5 294 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 NRBF2Q96F24 287 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 NEK6Q9HC98 313 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 FAM118AQ9NWS6 357 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 WARS2Q9UGM6 360 aaKnown RBP10.35□□□□□ -0.75
COL1A1-209ENST00000495677 MYRFQ9Y2G1 1151 aa10.35□□□□□ -0.75
COL1A1-209ENST00000495677 ZNF736B4DX44 427 aaPredicted RBP10.34□□□□□ -0.75
COL1A1-209ENST00000495677 G3V318 75 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 C15orf65H3BRN8 121 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 IGLV1-51P01701 117 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 ZNF20P17024 532 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 SLURP1P55000 103 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 FDX2Q6P4F2 183 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 PXT1Q8NFP0 134 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 OR5D18Q8NGL1 313 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 OR2G2Q8NGZ5 317 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 PLPPR1Q8TBJ4 325 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 CANT1Q8WVQ1 401 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 SPACA5Q96QH8 159 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 OR5B12Q96R08 314 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 OR4C12Q96R67 309 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 ZCCHC4Q9H5U6 513 aa10.34□□□□□ -0.75
COL1A1-209ENST00000495677 ORC5O43913 435 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 HLA-DRB1P01911 266 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 OCM2P0CE71 109 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 OCMP0CE72 109 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-209ENST00000495677 CRIP2P52943 208 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-209ENST00000495677 PITPNAQ00169 270 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 STEAP3Q658P3 488 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 C12orf73Q69YU5 71 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 SLC25A48Q6ZT89 311 aaKnown RBP10.33□□□□□ -0.76
COL1A1-209ENST00000495677 KCTD20Q7Z5Y7 419 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 ARPC1AQ92747 370 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 FLYWCH2Q96CP2 140 aaKnown RBP10.33□□□□□ -0.76
COL1A1-209ENST00000495677 LRGUKQ96M69 825 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 TBX5Q99593 518 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 GFOD1Q9NXC2 390 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 FRRS1LQ9P0K9 344 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 WSB1Q9Y6I7 421 aa10.33□□□□□ -0.76
COL1A1-209ENST00000495677 IGHV7-81A0A0B4J1V7 117 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 TRAV41A0A0B4J266 112 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 AQP12BA6NM10 295 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 ZAR1LA6NP61 321 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 HSPB6O14558 160 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 ATP6V0E1O15342 81 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 FAM107AO95990 144 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 HSPB1P04792 205 aaKnown RBP10.32□□□□□ -0.76
COL1A1-209ENST00000495677 LGALS1P09382 135 aaKnown RBP10.32□□□□□ -0.76
COL1A1-209ENST00000495677 TMEM225BP0DP42 221 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 DAPP51397 102 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 CCR9P51686 369 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 TMED1Q13445 227 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 KISS1Q15726 138 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 C19orf54Q5BKX5 351 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 FAHD1Q6P587 224 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 AQP12AQ8IXF9 295 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 UTP4Q969X6 686 aaKnown RBP10.32□□□□□ -0.76
COL1A1-209ENST00000495677 ELOVL1Q9BW60 279 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 ALX4Q9H161 411 aaPredicted RBP10.32□□□□□ -0.76
COL1A1-209ENST00000495677 IFT22Q9H7X7 185 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 STUB1Q9UNE7 303 aa10.32□□□□□ -0.76
COL1A1-209ENST00000495677 IGHV4OR15-8A0A075B7B6 117 aa10.31□□□□□ -0.76
COL1A1-209ENST00000495677 A0A087WW49 117 aa10.31□□□□□ -0.76
COL1A1-209ENST00000495677 B2RBV5 119 aa10.31□□□□□ -0.76
COL1A1-209ENST00000495677 SDCBPO00560 298 aaPredicted RBP10.31□□□□□ -0.76
COL1A1-209ENST00000495677 ZNF85Q03923 595 aa10.31□□□□□ -0.76
COL1A1-209ENST00000495677 ASCL4Q6XD76 172 aa10.31□□□□□ -0.76
COL1A1-209ENST00000495677 FAM220AQ7Z4H9 259 aa10.31□□□□□ -0.76
COL1A1-209ENST00000495677 TCTEX1D1Q8N7M0 179 aa10.31□□□□□ -0.76
COL1A1-209ENST00000495677 ZNF439Q8NDP4 499 aa10.31□□□□□ -0.76
COL1A1-209ENST00000495677 OR13C9Q8NGT0 318 aa10.31□□□□□ -0.76
COL1A1-209ENST00000495677 ARL11Q969Q4 196 aa10.31□□□□□ -0.76
COL1A1-209ENST00000495677 NR1H4Q96RI1 486 aaPredicted RBP10.31□□□□□ -0.76
COL1A1-209ENST00000495677 ERGIC3Q9Y282 383 aa10.31□□□□□ -0.76
COL1A1-209ENST00000495677 TRAV39A0A0B4J263 110 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 LANCL1O43813 399 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 SLC2A2P11168 524 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-209ENST00000495677 ZNF134P52741 427 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 RAB40BQ12829 278 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 LSAMPQ13449 338 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 MMDQ15546 238 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 ZNF691Q5VV52 312 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 LINC00322Q6ZN03 302 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-209ENST00000495677 SERPINA12Q8IW75 414 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms