RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 SUMF2Q8NBJ7 301 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 TMEM185AQ8NFB2 350 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 ANGPTL6Q8NI99 470 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 GCDHQ92947 438 aaPredicted RBP10.04□□□□□ -0.8
UPF3A-210ENST00000493727 ARHGAP5-AS1Q96IT6 56 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 NUDT16L1Q9BRJ7 211 aaKnown RBP10.04□□□□□ -0.8
UPF3A-210ENST00000493727 TMEM246Q9BRR3 403 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 DPCDQ9BVM2 203 aaPredicted RBP10.04□□□□□ -0.8
UPF3A-210ENST00000493727 ZMAT3Q9HA38 289 aaKnown RBP10.04□□□□□ -0.8
UPF3A-210ENST00000493727 TMEM165Q9HC07 324 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 ZNF581Q9P0T4 197 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 TRAV24A0A0B4J272 114 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 RAB27BO00194 218 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 SLC33A1O00400 549 aaPredicted RBP10.03□□□□□ -0.8
UPF3A-210ENST00000493727 RPS2P15880 293 aaKnown RBP10.03□□□□□ -0.8
UPF3A-210ENST00000493727 HIST1H1DP16402 221 aaKnown RBP10.03□□□□□ -0.8
UPF3A-210ENST00000493727 GNB3P16520 340 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 CHATP28329 748 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 GNG2P59768 71 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 IL13RA1P78552 427 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 PITPNAQ00169 270 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 RBM39Q14498 530 aaKnown RBP10.03□□□□□ -0.8
UPF3A-210ENST00000493727 CDNFQ49AH0 187 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 TMEM155Q4W5P6 130 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 Q6P435 159 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 C6orf201Q7Z4U5 140 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 SNX29P2Q8IUI4 249 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 ZNF561Q8N587 486 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 C3orf56Q8N813 242 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 S100ZQ8WXG8 99 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 MED30Q96HR3 178 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 GAFA1Q96PS6 74 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 TSC22D3Q99576 134 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 PECRQ9BY49 303 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 CHST6Q9GZX3 395 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 DNTTIP1Q9H147 329 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 PPA2Q9H2U2 334 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 IFT22Q9H7X7 185 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 CHMP1AQ9HD42 196 aaPredicted RBP10.03□□□□□ -0.8
UPF3A-210ENST00000493727 ING3Q9NXR8 418 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 RABL2AQ9UBK7 228 aaPredicted RBP10.03□□□□□ -0.8
UPF3A-210ENST00000493727 ZNF222Q9UK12 451 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 RABL2BQ9UNT1 228 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 X6R8D5 127 aa10.03□□□□□ -0.8
UPF3A-210ENST00000493727 UBE2QL1A1L167 161 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 TMEM235A6NFC5 223 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 CEACAM18A8MTB9 384 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 C22orf46C9J442 243 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 SIGLEC5O15389 551 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 NDUFB3O43676 98 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 CD3GP09693 182 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 NDUFB7P17568 137 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 ARFRP1Q13795 201 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 ATXN7L3Q14CW9 347 aaPredicted RBP10.02□□□□□ -0.81
UPF3A-210ENST00000493727 GRK1Q15835 563 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 PYDC2Q56P42 97 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 PLAC9Q5JTB6 97 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 SIGIRRQ6IA17 410 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 PYHIN1Q6K0P9 492 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 ZNF788Q6ZQV5 615 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 LINC00299Q6ZSB3 139 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 CCDC190Q86UF4 302 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 FAM216BQ8N7L0 139 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 OR8B3Q8NGG8 313 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 C15orf40Q8WUR7 153 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 SDSLQ96GA7 329 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 SNX22Q96L94 193 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 OR8B2Q96RD0 313 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 FAAP24Q9BTP7 215 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 SEBOXQ9HB31 216 aaPredicted RBP10.02□□□□□ -0.81
UPF3A-210ENST00000493727 ETAA1Q9NY74 926 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 RCC2Q9P258 522 aaKnown RBP10.02□□□□□ -0.81
UPF3A-210ENST00000493727 MIOXQ9UGB7 285 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 HSF4Q9ULV5 492 aa10.02□□□□□ -0.81
UPF3A-210ENST00000493727 A0A1B0GW55 424 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 FOXI3A8MTJ6 420 aaPredicted RBP10.01□□□□□ -0.81
UPF3A-210ENST00000493727 SERPINE3A8MV23 424 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 MFNGO00587 321 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 GLAP06280 429 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 DUX4L2P0CJ85 424 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 DUX4L3P0CJ86 424 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 DUX4L4P0CJ87 422 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 DUX4L5P0CJ88 424 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 DUX4L6P0CJ89 424 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 DUX4L7P0CJ90 424 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 KCNJ3P48549 501 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 TMEM50BP56557 158 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 EDDM3AQ14507 147 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 LRRC10Q5BKY1 277 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 RNASE12Q5GAN4 147 aaKnown RBP10.01□□□□□ -0.81
UPF3A-210ENST00000493727 PRR31Q5SQ13 230 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 ATPAF1Q5TC12 328 aaPredicted RBP10.01□□□□□ -0.81
UPF3A-210ENST00000493727 DUX4L9Q6RFH8 374 aaPredicted RBP10.01□□□□□ -0.81
UPF3A-210ENST00000493727 LYPD2Q6UXB3 125 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 RBMS3Q6XE24 437 aaKnown RBP10.01□□□□□ -0.81
UPF3A-210ENST00000493727 GDPD3Q7L5L3 318 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 RTN4RL2Q86UN3 420 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 ZNRF1Q8ND25 227 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 SETD6Q8TBK2 473 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 ST8SIA4Q92187 359 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms