RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TRAV8-7A0A075B6U6 113 aa17.63■□□□□ 0.41
RNF40-203ENST00000493683 SYNGR1O43759 233 aa17.63■□□□□ 0.41
RNF40-203ENST00000493683 IGF2P01344 180 aa17.63■□□□□ 0.41
RNF40-203ENST00000493683 NGFRP08138 427 aa17.63■□□□□ 0.41
RNF40-203ENST00000493683 UBE2V2Q15819 145 aa17.63■□□□□ 0.41
RNF40-203ENST00000493683 DYRK2Q92630 601 aa17.63■□□□□ 0.41
RNF40-203ENST00000493683 KIAA1551Q9HCM1 1747 aa17.63■□□□□ 0.41
RNF40-203ENST00000493683 CD82P27701 267 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 OR4X1Q8NH49 305 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 MT-ND6P03923 174 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 GAMTQ14353 236 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 LYZL2Q7Z4W2 148 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 BPIFA4PQ86YQ2 179 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 ARAP2Q8WZ64 1704 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 SRP14P37108 136 aaKnown RBP17.62■□□□□ 0.41
RNF40-203ENST00000493683 GAB4Q2WGN9 574 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 WDFY1Q8IWB7 410 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 RCC2Q9P258 522 aaKnown RBP17.62■□□□□ 0.41
RNF40-203ENST00000493683 PTP4A3O75365 173 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 LYPD8Q6UX82 237 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 OVCH2Q7RTZ1 564 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 COA4Q9NYJ1 87 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 CDIPTO14735 213 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 TRIP6Q15654 476 aaKnown RBP17.62■□□□□ 0.41
RNF40-203ENST00000493683 C1QL3Q5VWW1 255 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 TUSC5Q8IXB3 177 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 DEFB124Q8NES8 71 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 PTPMT1Q8WUK0 201 aaPredicted RBP17.62■□□□□ 0.41
RNF40-203ENST00000493683 MRGPRFQ96AM1 343 aa17.62■□□□□ 0.41
RNF40-203ENST00000493683 MPDU1O75352 247 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 HBZP02008 142 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 ZNF519Q8TB69 540 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 GPX7Q96SL4 187 aaPredicted RBP17.61■□□□□ 0.41
RNF40-203ENST00000493683 TMPRSS2O15393 492 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 CSN3P07498 182 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 RPL24P83731 157 aaKnown RBP17.61■□□□□ 0.41
RNF40-203ENST00000493683 CD300CQ08708 224 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 RBPMS2Q6ZRY4 209 aaKnown RBP17.61■□□□□ 0.41
RNF40-203ENST00000493683 MYOZ3Q8TDC0 251 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 A0A0U1RQV5 110 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 M0R296 226 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 TCL1AP56279 114 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 ADAD2Q8NCV1 583 aaKnown RBP17.61■□□□□ 0.41
RNF40-203ENST00000493683 NUP205Q92621 2012 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 A0A1W2PPV9 198 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 ZNF250P15622 560 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 ATP6V0CP27449 155 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 C16orf47Q6ZP98 133 aaPredicted RBP17.61■□□□□ 0.41
RNF40-203ENST00000493683 PGLYRP3Q96LB9 341 aa17.61■□□□□ 0.41
RNF40-203ENST00000493683 SNURFLB1AK76 121 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 F2RL2O00254 374 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 RPS4XP62701 263 aaKnown RBP17.6■□□□□ 0.41
RNF40-203ENST00000493683 SNRNP40Q96DI7 357 aaKnown RBP17.6■□□□□ 0.41
RNF40-203ENST00000493683 CLEC5AQ9NY25 188 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 IL19Q9UHD0 177 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 NHSQ6T4R5 1651 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 BCL2P10415 239 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 SSMEM1Q8WWF3 244 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 MS4A5Q9H3V2 200 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 PPP1R3EQ9H7J1 279 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 SAP30LQ9HAJ7 183 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 MSL2Q9HCI7 577 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 VSIG4Q9Y279 399 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 HARBI1Q96MB7 349 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 RBM11P57052 281 aaKnown RBP17.6■□□□□ 0.41
RNF40-203ENST00000493683 ADAMTS17Q8TE56 1095 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 MIOXQ9UGB7 285 aa17.6■□□□□ 0.41
RNF40-203ENST00000493683 HYAL3O43820 417 aaPredicted RBP17.59■□□□□ 0.41
RNF40-203ENST00000493683 LIFP15018 202 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 PNLIPP16233 465 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 ABHD14AQ9BUJ0 271 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 MRPL37Q9BZE1 423 aaKnown RBP17.59■□□□□ 0.41
RNF40-203ENST00000493683 ZNF552Q9H707 407 aaPredicted RBP17.59■□□□□ 0.41
RNF40-203ENST00000493683 ASCL3Q9NQ33 180 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 PRR13Q9NZ81 148 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 IFI6P09912 130 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 DLX1P56177 255 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 NSUN5P2Q63ZY6 315 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 ZFP30Q9Y2G7 519 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 CACNA1CQ13936 2221 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 HPRT1P00492 218 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 CELA2BP08218 269 aaPredicted RBP17.59■□□□□ 0.41
RNF40-203ENST00000493683 MOGAT3Q86VF5 341 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 ZNF383Q8NA42 475 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 FAM90A27PA6NNH2 459 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 SOX8P57073 446 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 CCDC144NLQ6NUI1 221 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 MRPL54Q6P161 138 aaKnown RBP17.59■□□□□ 0.41
RNF40-203ENST00000493683 NPTNQ9Y639 398 aa17.59■□□□□ 0.41
RNF40-203ENST00000493683 OR8I2Q8N0Y5 310 aa17.58■□□□□ 0.41
RNF40-203ENST00000493683 KLF7O75840 302 aaPredicted RBP17.58■□□□□ 0.41
RNF40-203ENST00000493683 DAOP14920 347 aa17.58■□□□□ 0.41
RNF40-203ENST00000493683 SPINK14Q6IE38 97 aa17.58■□□□□ 0.41
RNF40-203ENST00000493683 ABCA3Q99758 1704 aa17.58■□□□□ 0.41
RNF40-203ENST00000493683 IER3P46695 156 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 CLDN18P56856 261 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A10PA6NDY2 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A18PA6NE21 464 aa17.58■□□□□ 0.4
RNF40-203ENST00000493683 FAM90A16PA6NEW6 464 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms