RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 OR4C12Q96R67 309 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 ZCCHC4Q9H5U6 513 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 NEK6Q9HC98 313 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 ARGLU1Q9NWB6 273 aaPredicted RBP10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 H2AFY2Q9P0M6 372 aaPredicted RBP10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 A0A1W2PQL4 384 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 ZNF736B4DX44 427 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 G3V318 75 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 GNGT2O14610 69 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 ARPC1BO15143 372 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 ATP6V0E1O15342 81 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 IGLV1-51P01701 117 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 HLA-DRB1P01911 266 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 ISG15P05161 165 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 OR2T7P0C7T2 308 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 OCM2P0CE71 109 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 OCMP0CE72 109 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 HOXB6P17509 224 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 IL13RA2Q14627 380 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 RDH10Q8IZV5 341 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 PLPPR1Q8TBJ4 325 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 RNF166Q96A37 237 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 FGGYQ96C11 551 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 SPACA5Q96QH8 159 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 ALX4Q9H161 411 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 FAM118AQ9NWS6 357 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 STUB1Q9UNE7 303 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 MYRFQ9Y2G1 1151 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 WSB1Q9Y6I7 421 aa10.95□□□□□ -0.66
PRPF40A-211ENST00000493468 IGHV4OR15-8A0A075B7B6 117 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 A0A087WW49 117 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 TRAV41A0A0B4J266 112 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 GZMHP20718 246 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 PRKACGP22612 351 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 MS4A2Q01362 244 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 PTGES3Q15185 160 aaKnown RBP10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 ADGRG5Q8IZF4 528 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 TMEM163Q8TC26 289 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 LINC00476Q8WZB0 136 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 TBX5Q99593 518 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 ARL8BQ9NVJ2 186 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 GFOD1Q9NXC2 390 aa10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 WARS2Q9UGM6 360 aaKnown RBP10.94□□□□□ -0.66
PRPF40A-211ENST00000493468 C15orf65H3BRN8 121 aa10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 SLC2A2P11168 524 aaPredicted RBP10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 ARSBP15848 533 aa10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 VHLP40337 213 aa10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 CRIP2P52943 208 aaPredicted RBP10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 MMDQ15546 238 aa10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 C19orf54Q5BKX5 351 aa10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 FAM220AQ7Z4H9 259 aa10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 TCEANCQ8N8B7 351 aa10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 OR13C9Q8NGT0 318 aa10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 FLYWCH2Q96CP2 140 aaKnown RBP10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 ELOVL1Q9BW60 279 aa10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 RYR1P21817 5038 aa10.93□□□□□ -0.66
PRPF40A-211ENST00000493468 KMT2AQ03164 3969 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 IGHV7-81A0A0B4J1V7 117 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 M0R129 80 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 SDCBPO00560 298 aaPredicted RBP10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 SNX3O60493 162 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 TMEM225BP0DP42 221 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 LSAMPQ13449 338 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 SLC25A48Q6ZT89 311 aaKnown RBP10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 ANKRD13BQ86YJ7 626 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 TCTEX1D1Q8N7M0 179 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 PXT1Q8NFP0 134 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 OR2G2Q8NGZ5 317 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 UTP4Q969X6 686 aaKnown RBP10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 ASB9Q96DX5 294 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 LRGUKQ96M69 825 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 IFT22Q9H7X7 185 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 PARP11Q9NR21 331 aa10.92□□□□□ -0.66
PRPF40A-211ENST00000493468 TRAV39A0A0B4J263 110 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 ORC5O43913 435 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 HSPB1P04792 205 aaKnown RBP10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 CNTFRP26992 372 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 BLVRBP30043 206 aaPredicted RBP10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 KISS1Q15726 138 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 TMEM30BQ3MIR4 351 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 C12orf73Q69YU5 71 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 FDX2Q6P4F2 183 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 FAHD1Q6P587 224 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 HAPLN4Q86UW8 402 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 SATL1Q86VE3 508 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 ZNF439Q8NDP4 499 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 OR10H4Q8NGA5 316 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 DDB2Q92466 427 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 ARL11Q969Q4 196 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 NRBF2Q96F24 287 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 NR1H4Q96RI1 486 aaPredicted RBP10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 DPCDQ9BVM2 203 aaPredicted RBP10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 CST11Q9H112 138 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 GNG8Q9UK08 70 aa10.91□□□□□ -0.66
PRPF40A-211ENST00000493468 TMEM30CPA0ZSE6 113 aa10.9□□□□□ -0.66
PRPF40A-211ENST00000493468 C12orf77C9JDV5 145 aa10.9□□□□□ -0.66
PRPF40A-211ENST00000493468 SLC25A17O43808 307 aa10.9□□□□□ -0.66
PRPF40A-211ENST00000493468 LANCL1O43813 399 aa10.9□□□□□ -0.66
PRPF40A-211ENST00000493468 SOX15O60248 233 aa10.9□□□□□ -0.66
PRPF40A-211ENST00000493468 FAM107AO95990 144 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms