RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 OR1L1Q8NH94 360 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 ZNF431Q8TF32 576 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-219ENST00000491128 SECTM1Q8WVN6 248 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 FXYD6Q9H0Q3 95 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 TAF9BQ9HBM6 251 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 GLS2Q9UI32 602 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 FBXO9Q9UK97 447 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-219ENST00000491128 IGHV3-43A0A0B4J1X8 118 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 B8ZZF3 427 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 PRSS44E7EML9 344 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 TNFSF12O43508 249 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 C1QL1O75973 258 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 IGHV3-43DP0DP04 118 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 OMGP23515 440 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 ZBTB25P24278 435 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 SUPT4H1P63272 117 aaKnown RBP11.64□□□□□ -0.55
SMPD4-219ENST00000491128 C11orf88Q6PI97 169 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 DHRS11Q6UWP2 260 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 ZNF843Q8N446 348 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 OR13A1Q8NGR1 328 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 DOPEY1Q5JWR5 2465 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 DYSFO75923 2080 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 VSTM5A8MXK1 200 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 FAM25EA8MYX2 175 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 PPYP01298 95 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 SOD3P08294 240 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 LMO1P25800 156 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 GATA4P43694 442 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 FAM209AQ5JX71 171 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 NLRC3Q7RTR2 1065 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 ZDHHC22Q8N966 263 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 ANGPTL6Q8NI99 470 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 GRPEL2Q8TAA5 225 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 SEC22AQ96IW7 307 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 RHOFQ9HBH0 211 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 PLSCR3Q9NRY6 295 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 SPG11Q96JI7 2443 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 ZNF737O75373 536 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 SLC22A5O76082 557 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 ZNF728P0DKX0 622 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 FPR2P25090 351 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 ERVFRD-1P60508 538 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 CLEC18BQ6UXF7 455 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 SSX8Q7RTT4 187 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 C12orf45Q8N5I9 185 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-219ENST00000491128 TMEM185AQ8NFB2 350 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 OR2AK2Q8NG84 335 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 ZNF436Q9C0F3 470 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-219ENST00000491128 NPTNQ9Y639 398 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 DSCAMO60469 2012 aa11.63□□□□□ -0.55
SMPD4-219ENST00000491128 HCFC1P51610 2035 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 HSD17B6O14756 317 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 TMPRSS2O15393 492 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 TRAPPC2P0DI81 140 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 TRAPPC2BP0DI82 140 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 IRF2P14316 349 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 TNFRSF1AP19438 455 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 CD34P28906 385 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 GLP1RP43220 463 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 PIGPP57054 158 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 HLA-DRB3P79483 266 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 UTF1Q5T230 341 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 LYG2Q86SG7 212 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 PEG10Q86TG7 708 aaKnown RBP11.62□□□□□ -0.55
SMPD4-219ENST00000491128 OR11H4Q8NGC9 324 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 POM121Q96HA1 1249 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 LAMP3Q9UQV4 416 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 CSMD1Q96PZ7 3565 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 MPTX1A8MV57 137 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 SNRPGP15A8MWD9 76 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 C12orf77C9JDV5 145 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 HSPA12AO43301 675 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 ADAP1O75689 374 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 TK1P04183 234 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 COL8A2P25067 703 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 GNMTQ14749 295 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 ZMYND11Q15326 602 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 SWI5Q1ZZU3 235 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 ANKRD55Q3KP44 614 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 OR52L2PQ8NGH6 319 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 OR2T35Q8NGX2 323 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 OR10Z1Q8NGY1 313 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 MED30Q96HR3 178 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 DHRS9Q9BPW9 319 aa11.62□□□□□ -0.55
SMPD4-219ENST00000491128 ALX4Q9H161 411 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-219ENST00000491128 B9A039 149 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 CFHR2P36980 270 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 HERV-K104P61576 105 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 SNRPD2P62316 118 aaKnown RBP11.61□□□□□ -0.55
SMPD4-219ENST00000491128 TMEM128Q5BJH2 165 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 ZNF808Q8N4W9 903 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-219ENST00000491128 OR10V1Q8NGI7 309 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 OR10J5Q8NHC4 309 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 DLL4Q9NR61 685 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 CCL28Q9NRJ3 127 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 PIPOXQ9P0Z9 390 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 RNF150Q9ULK6 438 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 C14orf166Q9Y224 244 aaKnown RBP11.61□□□□□ -0.55
SMPD4-219ENST00000491128 TEX13DA0A0J9YY54 714 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-219ENST00000491128 KIR2DS1A0A191URI9 304 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms