RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FAM58AQ8N1B3 248 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 GAPTQ8N292 157 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 STPG2Q8N412 459 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 FAM71E2Q8N5Q1 922 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 OR4A4PQ8NGN8 299 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 MBD3L2Q8NHZ7 208 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 FAM216AQ8WUB2 273 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 DCUN1D4Q92564 292 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 SPIN2AQ99865 258 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 SPIN2BQ9BPZ2 258 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 HDHD3Q9BSH5 251 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 RNF126Q9BV68 326 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 ZNF471Q9BX82 626 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 BCL2L14Q9BZR8 327 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 WDR13Q9H1Z4 485 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 SEBOXQ9HB31 216 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 SDHAF2Q9NX18 166 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 MTCH1Q9NZJ7 389 aa7.2□□□□□ -1.26
VTI1A-207ENST00000489357 INTS1Q8N201 2190 aaKnown RBP7.2□□□□□ -1.26
VTI1A-207ENST00000489357 E5RGE8 158 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 TEX46H3BTG2 121 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 I3L521 148 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 WDR1O75083 606 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 DEDDO75618 318 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 ADAP1O75689 374 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 TUSC2O75896 110 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 JTBO76095 146 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 IGLV1-44P01699 117 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 FGF2P09038 288 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 GNLYP22749 145 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 IL32P24001 234 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 OPRM1P35372 400 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 NPBWR2P48146 333 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 KCNJ3P48549 501 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 LUMP51884 338 aaPredicted RBP7.19□□□□□ -1.26
VTI1A-207ENST00000489357 UCP2P55851 309 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 ERVK11-1P61568 191 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 TMEM187Q14656 261 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 ZNF146Q15072 292 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 MSMO1Q15800 293 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 C3AR1Q16581 482 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 IAH1Q2TAA2 248 aaPredicted RBP7.19□□□□□ -1.26
VTI1A-207ENST00000489357 ACSF3Q4G176 576 aaPredicted RBP7.19□□□□□ -1.26
VTI1A-207ENST00000489357 DMRTC1Q5HYR2 192 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 GPR157Q5UAW9 335 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 HAGHLQ6PII5 290 aaPredicted RBP7.19□□□□□ -1.26
VTI1A-207ENST00000489357 FAM180AQ6UWF9 173 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 SSX8Q7RTT4 187 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 CMTM1Q8IZ96 169 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 OR1S1Q8NH92 325 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 RNF141Q8WVD5 230 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 MAFIPQ8WZ33 124 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 SLAMF9Q96A28 289 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 C18orf12Q96KH6 178 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 TRIB1Q96RU8 372 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 CABLES2Q9BTV7 478 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 PIGMQ9H3S5 423 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 TMEM100Q9NV29 134 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 NSG2Q9Y328 171 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 DOCK7Q96N67 2140 aa7.19□□□□□ -1.26
VTI1A-207ENST00000489357 RAB19A4D1S5 217 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 GPR31O00270 319 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 MPPED1O15442 326 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 FGF16O43320 207 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 PGA5P0DJD9 388 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 SLC25A6P12236 298 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 CCL2P13500 99 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 MMP9P14780 707 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 PRKACAP17612 351 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 PI3P19957 117 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 KITLGP21583 273 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 DUSP1P28562 367 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 KIR2DL2P43627 348 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-207ENST00000489357 PAX5Q02548 391 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 MBNL2Q5VZF2 373 aaKnown RBP7.18□□□□□ -1.26
VTI1A-207ENST00000489357 ZNF565Q8N9K5 539 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 MSI2Q96DH6 328 aaKnown RBP7.18□□□□□ -1.26
VTI1A-207ENST00000489357 SAT2Q96F10 170 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-207ENST00000489357 KIRREL1Q96J84 757 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 OR10C1Q96KK4 312 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 TMEM56Q96MV1 263 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 NRIP2Q9BQI9 281 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 REG4Q9BYZ8 158 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 FGF23Q9GZV9 251 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-207ENST00000489357 TMEM222Q9H0R3 208 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 TLNRD1Q9H1K6 362 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 TMEM56-RWDD3S4R434 201 aa7.18□□□□□ -1.26
VTI1A-207ENST00000489357 C3orf85A0A1B0GTC6 90 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 H0Y980 276 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 H0YIZ8 118 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 K7EPK0 472 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 SH2D1BO14796 132 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 OR5AC1P0C628 307 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 AADACP22760 399 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 CA6P23280 308 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 LMO1P25800 156 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 TIMP3P35625 211 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 P2RY1P47900 373 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 HLA-DRB3P79483 266 aa7.17□□□□□ -1.26
VTI1A-207ENST00000489357 RAB32Q13637 225 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms