RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 hADV38S2A0JD32 116 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 ZNF736B4DX44 427 aaPredicted RBP13.24□□□□□ -0.29
CLDN11-208ENST00000488989 DIRAS3O95661 229 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 GZMHP20718 246 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 INPP1P49441 399 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 SEC61A1P61619 476 aaKnown RBP13.24□□□□□ -0.29
CLDN11-208ENST00000488989 ACTBL2Q562R1 376 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 VAX1Q5SQQ9 334 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 ZNF57Q68EA5 555 aaPredicted RBP13.24□□□□□ -0.29
CLDN11-208ENST00000488989 OR5AP2Q8NGF4 316 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 SETD6Q8TBK2 473 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 CCDC107Q8WV48 283 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 RAB39BQ96DA2 213 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 NARFLQ9H6Q4 476 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 LINC00574Q9H8X3 128 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 TBC1D24Q9ULP9 559 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 UBE2J1Q9Y385 318 aaPredicted RBP13.24□□□□□ -0.29
CLDN11-208ENST00000488989 LINC00312Q9Y6C7 94 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 TRAV39A0A0B4J263 110 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 KIAA1324LA8MWY0 1029 aaPredicted RBP13.23□□□□□ -0.29
CLDN11-208ENST00000488989 C15orf65H3BRN8 121 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 FABP7O15540 132 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 CD3DP04234 171 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 AKAIN1P0CW23 69 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 HLA-DMAP28067 261 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 TAS2R46P59540 309 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 GNB2P62879 340 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 RPL31P62899 125 aaKnown RBP13.23□□□□□ -0.29
CLDN11-208ENST00000488989 ASAH1Q13510 395 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 ESCO2Q56NI9 601 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 Q5PR19 223 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 STEAP1BQ6NZ63 245 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 ZNF565Q8N9K5 539 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 LY6G5BQ8NDX9 201 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 OR4A4PQ8NGN8 299 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 MRGPRDQ8TDS7 321 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 DMRTB1Q96MA1 342 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 FOXC2Q99958 501 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 CABLES2Q9BTV7 478 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 SSBP3Q9BWW4 388 aaPredicted RBP13.23□□□□□ -0.29
CLDN11-208ENST00000488989 TAF9BQ9HBM6 251 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 HRASLSQ9HDD0 168 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 C19orf12Q9NSK7 152 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 TAS2R3Q9NYW6 316 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 CR1P17927 2039 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 ABCA2Q9BZC7 2435 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 CSMD2Q7Z408 3487 aa13.23□□□□□ -0.29
CLDN11-208ENST00000488989 TRGV10A0A0A0MS01 117 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 NAP1L6A6NFF2 107 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 ZNF729A6NN14 1252 aaPredicted RBP13.22□□□□□ -0.29
CLDN11-208ENST00000488989 C12orf77C9JDV5 145 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 NPIPB11E5RHQ5 1161 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 FCER2P06734 321 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 SCTP09683 121 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 CTXN2P0C2S0 81 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 GSTT2P0CG29 244 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 HRH1P35367 487 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 GLP1RP43220 463 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 CDK10Q15131 360 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 C17orf58Q2M2W7 97 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 TMEM200BQ69YZ2 307 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 BTN2A1Q7KYR7 527 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 OVCH2Q7RTZ1 564 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 OR4C16Q8NGL9 310 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 COX4I2Q96KJ9 171 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 KCNIP1Q9NZI2 227 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 RPUSD1Q9UJJ7 312 aaKnown RBP13.22□□□□□ -0.29
CLDN11-208ENST00000488989 POLR3KQ9Y2Y1 108 aaPredicted RBP13.22□□□□□ -0.29
CLDN11-208ENST00000488989 VPS13CQ709C8 3753 aa13.22□□□□□ -0.29
CLDN11-208ENST00000488989 IGKV1-6A0A0C4DH72 117 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 RAB3DO95716 219 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 ZNF735P0CB33 412 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 FAUP35544 74 aaKnown RBP13.21□□□□□ -0.29
CLDN11-208ENST00000488989 ZNF273Q14593 569 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 MEF2DQ14814 521 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 HERPUD1Q15011 391 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 CHRFAM7AQ494W8 412 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 RNASE10Q5GAN6 216 aaKnown RBP13.21□□□□□ -0.29
CLDN11-208ENST00000488989 CD276Q5ZPR3 534 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 C5orf24Q7Z6I8 188 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 OR5H2Q8NGV7 314 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 H1FXQ92522 213 aaKnown RBP13.21□□□□□ -0.29
CLDN11-208ENST00000488989 DACT3Q96B18 629 aaPredicted RBP13.21□□□□□ -0.29
CLDN11-208ENST00000488989 C1orf159Q96HA4 380 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 TINAGL1Q9GZM7 467 aaPredicted RBP13.21□□□□□ -0.29
CLDN11-208ENST00000488989 C11orf54Q9H0W9 315 aaPredicted RBP13.21□□□□□ -0.29
CLDN11-208ENST00000488989 RAB9BQ9NP90 201 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 CALYQ9NYX4 217 aa13.21□□□□□ -0.29
CLDN11-208ENST00000488989 WNK2Q9Y3S1 2297 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 KBTBD11-OT1A0A1B0GTJ5 212 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 C22orf46C9J442 243 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 M0QYG6 137 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 F2RL2O00254 374 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 PHF1O43189 567 aaPredicted RBP13.2□□□□□ -0.3
CLDN11-208ENST00000488989 LYRM1O43325 122 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 FOXH1O75593 365 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 HBZP02008 142 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 PMP2P02689 132 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 USF1P22415 310 aaPredicted RBP13.2□□□□□ -0.3
CLDN11-208ENST00000488989 SSTR5P35346 364 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms