RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 GPR50Q13585 617 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 IRF3Q14653 427 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 ACSM3Q53FZ2 586 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 RBM48Q5RL73 367 aaKnown RBP14.21□□□□□ -0.13
ITGB1-215ENST00000488494 RAB12Q6IQ22 244 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 IZUMO2Q6UXV1 221 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 C16orf82Q7Z2V1 217 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 FAM110DQ8TAY7 271 aaPredicted RBP14.21□□□□□ -0.13
ITGB1-215ENST00000488494 UBALD1Q8TB05 177 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 CCDC107Q8WV48 283 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 CAPSLQ8WWF8 208 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 FAM46BQ96A09 425 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 MRPS24Q96EL2 167 aaKnown RBP14.21□□□□□ -0.13
ITGB1-215ENST00000488494 AKR1E2Q96JD6 320 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 UQCC2Q9BRT2 126 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 SELENOIQ9C0D9 397 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 VCX3BQ9H321 246 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 LIN7BQ9HAP6 207 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 PSG11Q9UQ72 335 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 TPRKBQ9Y3C4 175 aa14.21□□□□□ -0.13
ITGB1-215ENST00000488494 WNK1Q9H4A3 2382 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 H3BUI4 141 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 WIPF1O43516 503 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 PEX14O75381 377 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 FBXO24O75426 580 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 MNDAP41218 407 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 GP2P55259 537 aaKnown RBP14.2□□□□□ -0.14
ITGB1-215ENST00000488494 MADCAM1Q13477 382 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 MS4A15Q8N5U1 240 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 OR10A7Q8NGE5 316 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 UFD1Q92890 307 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 Q96M66 194 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 SLC25A33Q9BSK2 321 aa14.2□□□□□ -0.14
ITGB1-215ENST00000488494 A0A1W2PPE3 182 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 MCRIP1C9JLW8 97 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 H0YHG0 523 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 C15orf65H3BRN8 121 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 SDCBPO00560 298 aaPredicted RBP14.19□□□□□ -0.14
ITGB1-215ENST00000488494 RGS10O43665 173 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 OR2F2O95006 317 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 MT-ND4P03905 459 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 VHLP40337 213 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 LIPKQ5VXJ0 399 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 LRRTM1Q86UE6 522 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 LYG1Q8N1E2 194 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 OR10X1Q8NGY0 326 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 OR56B4Q8NH76 319 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 PHYHIPQ92561 330 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 ARL11Q969Q4 196 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 CYYR1Q96J86 154 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 ETAA1Q9NY74 926 aa14.19□□□□□ -0.14
ITGB1-215ENST00000488494 A0A1W2PPI3 338 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 KCNAB3O43448 404 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 HSMCR30P0CW71 290 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 CD28P10747 220 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 GZMHP20718 246 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 HSPA13P48723 471 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 DIAPH2-AS1Q14236 149 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 HSD17B12Q53GQ0 312 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 UNQ9370/PRO34162Q6UXP9 181 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 SLC16A12Q6ZSM3 486 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 CEACAM19Q7Z692 300 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 TMEM203Q969S6 136 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 RBM14Q96PK6 669 aaKnown RBP14.18□□□□□ -0.14
ITGB1-215ENST00000488494 WNT10AQ9GZT5 417 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 CCDC90BQ9GZT6 254 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 CST11Q9H112 138 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 DUSP21Q9H596 190 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 TRAPPC2LQ9UL33 140 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 PEX16Q9Y5Y5 336 aa14.18□□□□□ -0.14
ITGB1-215ENST00000488494 IGHV3-43A0A0B4J1X8 118 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A10PA6NDY2 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A18PA6NE21 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A16PA6NEW6 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A20PA6NIJ5 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A7PA6NKC0 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 SH2D7A6NKC9 451 aaPredicted RBP14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A12PA8MX19 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A5PA8MXJ8 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A23PA8MXZ1 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 C12orf77C9JDV5 145 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 HSD17B6O14756 317 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 SC5DO75845 299 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 MPIG6BO95866 241 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 SNRNP70P08621 437 aaKnown RBP14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A15PP0C7V4 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A13PP0C7W8 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A14PP0C7W9 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM90A24PP0C7X0 464 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 IGHV3-43DP0DP04 118 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 CRHBPP24387 322 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 DEFA6Q01524 100 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 ABCA11PQ4W5N1 156 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 SIGIRRQ6IA17 410 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 FAM53AQ6NSI3 398 aaPredicted RBP14.17□□□□□ -0.14
ITGB1-215ENST00000488494 DRAM1Q8N682 238 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 OR4K15Q8NH41 348 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 WIPF2Q8TF74 440 aaPredicted RBP14.17□□□□□ -0.14
ITGB1-215ENST00000488494 CNBD2Q96M20 576 aa14.17□□□□□ -0.14
ITGB1-215ENST00000488494 KCNK15Q9H427 330 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms