RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 TMEM123Q8N131 208 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 LGI3Q8N145 548 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM252Q8N6L7 170 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 SLC38A9Q8NBW4 561 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 CSNK2A3Q8NEV1 391 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR5L1Q8NGL2 311 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF519Q8TB69 540 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 SOCS4Q8WXH5 440 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 APH1AQ96BI3 265 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 MSI2Q96DH6 328 aaKnown RBP4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM56Q96MV1 263 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 LRRC3BQ96PB8 259 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 SMIM7Q9BQ49 75 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 RAB11FIP5Q9BXF6 653 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM59Q9BXS4 323 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF665Q9H7R5 613 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 IL23AQ9NPF7 189 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 MRPL22Q9NWU5 206 aaKnown RBP4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 GNG13Q9P2W3 67 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 TP53TG3Q9ULZ0 132 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 PTRH2Q9Y3E5 179 aaKnown RBP4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM56-RWDD3S4R434 201 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 SCN3AQ9NY46 2000 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 VSTM2BA6NLU5 285 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 PRRT4C9JH25 899 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 H7C1C5 153 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SDCBPO00560 298 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SOCS1O15524 211 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 LMX1BO60663 402 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 RAMP3O60896 148 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 TNFSF15O95150 251 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 PDGFBP01127 241 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 H2BFMP0C1H6 154 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 TUBG1P23258 451 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 CST5P28325 142 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 GCH1P30793 250 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 CDKN1AP38936 164 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 RAB28P51157 221 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 LCN6P62502 163 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SRPXP78539 464 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 RPL18Q07020 188 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 NFATC4Q14934 902 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM95Q3KNT9 176 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM41BQ5BJD5 291 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 TCEAL5Q5H9L2 206 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 KHDC1LQ5JSQ8 128 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 VWA1Q6PCB0 445 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 UNQ5815/PRO19632Q6UWF5 114 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 COX15Q7KZN9 410 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 ODF3L1Q8IXM7 274 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 RAB42Q8N4Z0 105 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR52M1Q8NGK5 317 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 NT5CQ8TCD5 201 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SSC4DQ8WTU2 575 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 IL22RA2Q969J5 263 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SLAMF6Q96DU3 332 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 ARHGAP5-AS1Q96IT6 56 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 ADOQ96SZ5 270 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 NRTNQ99748 197 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 ATP5SQ99766 215 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 PSMG3Q9BT73 122 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 MRPL13Q9BYD1 178 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 VN1R1Q9GZP7 353 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 S1PR5Q9H228 398 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF430Q9H8G1 570 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 CHODLQ9H9P2 273 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 MANBALQ9NQG1 85 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SLC35D1Q9NTN3 355 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 BET1LQ9NYM9 111 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 ELOVL5Q9NYP7 299 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 CLN8Q9UBY8 286 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SMPXQ9UHP9 88 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 MRPS28Q9Y2Q9 187 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 RBM7Q9Y580 266 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 RFNGQ9Y644 331 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SPTBP11277 2137 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 TRAV9-1A0A075B6T8 112 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SAA2-SAA4A0A096LPE2 208 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 IGLC7A0M8Q6 106 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 PRSS37A4D1T9 235 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 FAM24AA6NFZ4 105 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 LRRC3CA6NJW4 275 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZFP92A6NM28 416 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 HIDE1A8MVS5 230 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 GRXCR1A8MXD5 290 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 J3QR06 171 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 MLNRO43193 412 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 HOXA3O43365 443 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 PIAS2O75928 621 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 IGHMP01871 453 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 REG1AP05451 166 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SCGB1A1P11684 91 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 CTSEP14091 401 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 TSPOP30536 169 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 GABRA3P34903 492 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF93P35789 620 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 SUMO3P55854 103 aaPredicted RBP4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 PIGPP57054 158 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 PPP1CBP62140 327 aa4.07□□□□□ -1.76
CDC42BPA-213ENST00000488131 MEF2BQ02080 365 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms