RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 PNRC1Q12796 327 aaPredicted RBP10.45□□□□□ -0.74
COL3A1-206ENST00000487010 KIR2DS1Q14954 304 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 PDZD11Q5EBL8 140 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 YRDCQ86U90 279 aaKnown RBP10.45□□□□□ -0.74
COL3A1-206ENST00000487010 GGNQ86UU5 652 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 C1orf87Q8N0U7 546 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 ZNF295-AS1Q8N0V1 137 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 HS3ST6Q96QI5 342 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 PHF7Q9BWX1 381 aaPredicted RBP10.45□□□□□ -0.74
COL3A1-206ENST00000487010 ZNF576Q9H609 170 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 GPR35Q9HC97 309 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 WNT16Q9UBV4 365 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 MRPS17Q9Y2R5 130 aaKnown RBP10.45□□□□□ -0.74
COL3A1-206ENST00000487010 SDK1Q7Z5N4 2213 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 A0A0G2JRQ6 117 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 OR5H1A6NKK0 313 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 TGOLN2O43493 480 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 TNFSF12O43508 249 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 LY86O95711 162 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 CYB5R3P00387 301 aaPredicted RBP10.45□□□□□ -0.74
COL3A1-206ENST00000487010 MMP7P09237 267 aaPredicted RBP10.45□□□□□ -0.74
COL3A1-206ENST00000487010 RIPPLY2Q5TAB7 128 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 SLC25A24Q6NUK1 477 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 RPS19BP1Q86WX3 136 aaKnown RBP10.45□□□□□ -0.74
COL3A1-206ENST00000487010 SAXO1Q8IYX7 474 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 KCNE4Q8WWG9 221 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 GPR146Q96CH1 333 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 PRDM14Q9GZV8 571 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 FGF23Q9GZV9 251 aaPredicted RBP10.45□□□□□ -0.74
COL3A1-206ENST00000487010 ATP23Q9Y6H3 246 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 A0A1B0GU03 582 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 KIAA1324LA8MWY0 1029 aaPredicted RBP10.44□□□□□ -0.74
COL3A1-206ENST00000487010 CLDN34H7C241 214 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 CXCL13O43927 109 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 GDF9O60383 454 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 BCL2P10415 239 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 FGF5P12034 268 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 SLC25A6P12236 298 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 F2RP25116 425 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 SRD5A2P31213 254 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 MLF1P58340 268 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 CD81P60033 236 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 TMEM267Q0VDI3 215 aaPredicted RBP10.44□□□□□ -0.74
COL3A1-206ENST00000487010 MPV17LQ2QL34 196 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 CPEB3Q8NE35 698 aaKnown RBP10.44□□□□□ -0.74
COL3A1-206ENST00000487010 OR2V1Q8NHB1 315 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 MBD3L1Q8WWY6 194 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 RCC1LQ96I51 464 aaKnown RBP10.44□□□□□ -0.74
COL3A1-206ENST00000487010 RAB40CQ96S21 281 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 DUSP23Q9BVJ7 150 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 RPRMQ9NS64 109 aa10.44□□□□□ -0.74
COL3A1-206ENST00000487010 ZFP92A6NM28 416 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 H3BP45 60 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 HSPB6O14558 160 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 PHOX2AO14813 284 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 HLA-HP01893 362 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 ZFP36L1Q07352 338 aaKnown RBP10.43□□□□□ -0.74
COL3A1-206ENST00000487010 PRDX4Q13162 271 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 ZNF787Q6DD87 383 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 ABLIM2Q6H8Q1 611 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 PCSK4Q6UW60 755 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 COLCA1Q6ZS62 124 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 OR56B2PQ8NGI1 322 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 SCGB1C1Q8TD33 95 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 NEK7Q8TDX7 302 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 C14orf144Q96I85 54 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 RSG1Q9BU20 258 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 ZNF665Q9H7R5 613 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 SDF2L1Q9HCN8 221 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 IL36RNQ9UBH0 155 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 CEP290O15078 2479 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 NCKAP5O14513 1909 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 FABP4P15090 132 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 EPHA8P29322 1005 aaPredicted RBP10.43□□□□□ -0.74
COL3A1-206ENST00000487010 GPM6AP51674 278 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 ZNF726P1Q15940 193 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 CA5BP1Q8WTZ4 195 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 S100PBPQ96BU1 408 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 REPIN1Q9BWE0 567 aaKnown RBP10.43□□□□□ -0.74
COL3A1-206ENST00000487010 VSIRQ9H7M9 311 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 MTCH1Q9NZJ7 389 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 CRIM1Q9NZV1 1036 aa10.43□□□□□ -0.74
COL3A1-206ENST00000487010 TRBV24-1A0A075B6N3 115 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 A0A0G2JMM0 328 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 A0A1W2PPB8 328 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 A0A1W2PRS3 328 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 KIR3DP1A8MWS1 328 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 KLF7O75840 302 aaPredicted RBP10.42□□□□□ -0.74
COL3A1-206ENST00000487010 IGFBP4P22692 258 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 S100GP29377 79 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 GAMTQ14353 236 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 LCN15Q6UWW0 184 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 AGBL5Q8NDL9 886 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 OR10D3Q8NH80 312 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 ADGRG7Q96K78 797 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 RHOVQ96L33 236 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 P2RX4Q99571 388 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 SDK2Q58EX2 2172 aa10.42□□□□□ -0.74
COL3A1-206ENST00000487010 TNRC6BQ9UPQ9 1833 aaKnown RBP10.42□□□□□ -0.74
COL3A1-206ENST00000487010 PIGBOS1A0A0B4J2F0 54 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms