RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 GK3PQ14409 553 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF273Q14593 569 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 SLC35D3Q5M8T2 416 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 LDLRAD2Q5SZI1 272 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF684Q5T5D7 378 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 MINOS1Q5TGZ0 78 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 TMEM42Q69YG0 159 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 OR2T5Q6IEZ7 315 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 TRPM8Q7Z2W7 1104 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 KRT77Q7Z794 578 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 PIGWQ7Z7B1 504 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 CENPVQ7Z7K6 275 aaPredicted RBP3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF573Q86YE8 665 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 OR4M1Q8NGD0 313 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 OR2T29Q8NH02 315 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 TEX47Q8TBZ9 253 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 OR5M11Q96RB7 305 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 OR8B4Q96RC9 309 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 FEVQ99581 238 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 ASCL2Q99929 193 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 B9D2Q9BPU9 175 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 NRIP2Q9BQI9 281 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 MROQ9BYG7 248 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 GPR61Q9BZJ8 451 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 YIPF3Q9GZM5 350 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 OR51V1Q9H2C8 321 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 MUC13Q9H3R2 512 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 MAGIXQ9H6Y5 334 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 REEP1Q9H902 201 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 MED20Q9H944 212 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 HES4Q9HCC6 221 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 FAM206AQ9NX38 181 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 NDE1Q9NXR1 346 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 ACTR3BQ9P1U1 418 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 DNAJB9Q9UBS3 223 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 ENPP5Q9UJA9 477 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 PIGLQ9Y2B2 252 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 POLDIP2Q9Y2S7 368 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 TSSC4Q9Y5U2 329 aaPredicted RBP3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 MINOS1-NBL1R4GNA1 71 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 STAB2Q8WWQ8 2551 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 WI2-2373I1.2A0A1W2PRP0 233 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 TCRBV4S1A1TA0A5B7 111 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 hADV38S2A0JD32 116 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 PQLC2LA1A4F0 135 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 ARRDC5A6NEK1 342 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 DHRS7CA6NNS2 312 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 E9PQ18 207 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 H3BN98 237 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 DLGAP1O14490 977 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF737O75373 536 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 DHRS3O75911 302 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 CLIC3O95833 236 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 TTRP02766 147 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 PIPP12273 146 aaPredicted RBP3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 SLC2A5P22732 501 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 HTR1DP28221 377 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 BRS3P32247 399 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 CEBPDP49716 269 aaPredicted RBP3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 KRTAP10-8P60410 259 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 ACTR3P61158 418 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 CDK5Q00535 292 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 SLC34A1Q06495 639 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 IL24Q13007 206 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 GAGE5Q13069 117 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 GAGE6Q13070 117 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 DYNC1I2Q13409 638 aaKnown RBP3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 IL18R1Q13478 541 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 DCTN2Q13561 401 aaKnown RBP3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 GINS1Q14691 196 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF829Q3KNS6 432 aaPredicted RBP3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 TMEM95Q3KNT9 176 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 FAM98BQ52LJ0 330 aaKnown RBP3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 DMRTC1Q5HYR2 192 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 TCTEX1D4Q5JR98 221 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 CLVS2Q5SYC1 327 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 PLCXD3Q63HM9 321 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 PLBD1Q6P4A8 553 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 ZBTB49Q6ZSB9 765 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 Q6ZSR3 168 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 CCDC121Q6ZUS5 278 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 GDPD3Q7L5L3 318 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 COMMD2Q86X83 199 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 CPOQ8IVL8 374 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF679Q8IYX0 411 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 DEFB107AQ8IZN7 70 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 OR8H2Q8N162 312 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 ARHGAP24Q8N264 748 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 OR10G2Q8NGC3 310 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 OR4X2Q8NGF9 303 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 OR51E1Q8TCB6 317 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 GIPC3Q8TF64 312 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 ASB17Q8WXJ9 295 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 MYDGFQ969H8 173 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 AKR1E2Q96JD6 320 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF488Q96MN9 340 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF714Q96N38 554 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 TEAD3Q99594 435 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 NIPSNAP1Q9BPW8 284 aa3.11□□□□□ -1.91
SNRNP40-205ENST00000486941 FAM110AQ9BQ89 295 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms