RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 FAM90A12PA8MX19 464 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 FAM90A5PA8MXJ8 464 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 MT-ND4P03905 459 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 FAM90A15PP0C7V4 464 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 FAM90A13PP0C7W8 464 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 FAM90A14PP0C7W9 464 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 FAM90A24PP0C7X0 464 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 FAM106CPP0CH98 169 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 EMX1Q04741 257 aaPredicted RBP14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 AWAT2Q6E213 333 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 UNQ9370/PRO34162Q6UXP9 181 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 THNSL2Q86YJ6 484 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 MS4A15Q8N5U1 240 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 NEK7Q8TDX7 302 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 NRG4Q8WWG1 115 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 TOMM40LQ969M1 308 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 MND1Q9BWT6 205 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 SCN3BQ9NY72 215 aa14.71□□□□□ -0.05
PRPF40A-209ENST00000486100 MCRIP1C9JLW8 97 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 C15orf65H3BRN8 121 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 ORC5O43913 435 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 MADCAM1Q13477 382 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 TMEM95Q3KNT9 176 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 ACSM3Q53FZ2 586 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 PDLIM3Q53GG5 364 aaPredicted RBP14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 FBLN7Q53RD9 439 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 ZNF497Q6ZNH5 498 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 NKAIN3Q8N8D7 197 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 OR52M1Q8NGK5 317 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 CCDC107Q8WV48 283 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 ARL11Q969Q4 196 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 UQCC2Q9BRT2 126 aa14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 RCC2Q9P258 522 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-209ENST00000486100 FAM90A10PA6NDY2 464 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 FAM90A7PA6NKC0 464 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 FAM90A23PA8MXZ1 464 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 M0QZK8 103 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 OPN1MWP04001 364 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 OPN1MW2P0DN77 364 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 OPN1MW3P0DN78 364 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 GNG10P50151 68 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 RAB7AP51149 207 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 AQP4P55087 323 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 SPHARQ15513 63 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 NSUN5P1Q3KNT7 163 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 ABCA11PQ4W5N1 156 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 NDUFA11Q86Y39 141 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 LYG1Q8N1E2 194 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 TMEM104Q8NE00 496 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 OR10X1Q8NGY0 326 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 BANF2Q9H503 90 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 GHRLQ9UBU3 117 aa14.69□□□□□ -0.06
PRPF40A-209ENST00000486100 TET2Q6N021 2002 aaPredicted RBP14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 H0YHG0 523 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 AIPO00170 330 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 AMY1AP04745 511 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 AMY2AP04746 511 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 GLAP06280 429 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 MGMTP16455 207 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 GP2P55259 537 aaKnown RBP14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 GPR50Q13585 617 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 DIAPH2-AS1Q14236 149 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 INSL4Q14641 139 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 RAB12Q6IQ22 244 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 OR8H3Q8N146 312 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 OR5AU1Q8NGC0 362 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 CITED2Q99967 270 aaPredicted RBP14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 SELENOIQ9C0D9 397 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 ETAA1Q9NY74 926 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 LSM2Q9Y333 95 aaKnown RBP14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 PEX16Q9Y5Y5 336 aa14.68□□□□□ -0.06
PRPF40A-209ENST00000486100 A0A1W2PPE3 182 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 A0A1W2PPI3 338 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 SDCBPO00560 298 aaPredicted RBP14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 CRTAPO75718 401 aaPredicted RBP14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 LPLP06858 475 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 SNRNP70P08621 437 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 FUT3P21217 361 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 LOXL3P58215 753 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 SLC35A2P78381 396 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 IRF3Q14653 427 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 SYT6Q5T7P8 510 aaPredicted RBP14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 CENPVQ7Z7K6 275 aaPredicted RBP14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 GAPTQ8N292 157 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 LINC00311Q8N616 119 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 DRAM1Q8N682 238 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 C8orf31Q8N9H6 132 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 OR56B4Q8NH76 319 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 SGCDQ92629 289 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 Q96M66 194 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 GFOD1Q9NXC2 390 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 TRAPPC2LQ9UL33 140 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 TPRKBQ9Y3C4 175 aa14.67□□□□□ -0.06
PRPF40A-209ENST00000486100 ADARB2-AS1A8MUL3 147 aa14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 CA11O75493 328 aa14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 CD83Q01151 205 aa14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 ZNF816Q0VGE8 651 aaPredicted RBP14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 MED22Q15528 200 aa14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 Q3ZCU0 254 aa14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 UBALD1Q8TB05 177 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms