RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 FAM90A1Q86YD7 464 aa11.15□□□□□ -0.63
CPNE1-225ENST00000483495 KIRREL1Q96J84 757 aa11.15□□□□□ -0.63
CPNE1-225ENST00000483495 TP53RKQ96S44 253 aa11.15□□□□□ -0.63
CPNE1-225ENST00000483495 DMRTA2Q96SC8 542 aa11.15□□□□□ -0.63
CPNE1-225ENST00000483495 VKORC1Q9BQB6 163 aa11.15□□□□□ -0.63
CPNE1-225ENST00000483495 OR14J1Q9UGF5 321 aa11.15□□□□□ -0.63
CPNE1-225ENST00000483495 KANTRA0A1W2PQU2 76 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 TMEM30CPA0ZSE6 113 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 SRRM5B3KS81 715 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 PTAFRP25105 342 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 UBA52P62987 128 aaKnown RBP11.14□□□□□ -0.63
CPNE1-225ENST00000483495 RAB32Q13637 225 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 TMEM108Q6UXF1 575 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 TBC1D26Q86UD7 250 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 SCARB1Q8WTV0 552 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 LRRC29Q8WV35 223 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 DCUN1D4Q92564 292 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 MEGF10Q96KG7 1140 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 TMEM222Q9H0R3 208 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 DNAJB11Q9UBS4 358 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 SH3BGRL2Q9UJC5 107 aa11.14□□□□□ -0.63
CPNE1-225ENST00000483495 hCG_1807616A0A1W2PRN6 198 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 PHF1O43189 567 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-225ENST00000483495 WNT2P09544 360 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 GATA4P43694 442 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 LYZL2Q7Z4W2 148 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 BVESQ8NE79 360 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 LILRB1Q8NHL6 650 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-225ENST00000483495 LHFPL5Q8TAF8 219 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 TMEM56Q96MV1 263 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 CNTNAP3BQ96NU0 1288 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 CNTNAP3Q9BZ76 1288 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 MRPL37Q9BZE1 423 aaKnown RBP11.13□□□□□ -0.63
CPNE1-225ENST00000483495 CCL28Q9NRJ3 127 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 OR5AC2Q9NZP5 309 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 GSKIPQ9P0R6 139 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 KIF25Q9UIL4 384 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 FBXO9Q9UK97 447 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-225ENST00000483495 TMEM56-RWDD3S4R434 201 aa11.13□□□□□ -0.63
CPNE1-225ENST00000483495 HEXAP06865 529 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 THBDP07204 575 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 OR3A1P47881 315 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 SELENOVP59797 346 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 HOXA4Q00056 320 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-225ENST00000483495 TESK1Q15569 626 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 ESCO2Q56NI9 601 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 VHLLQ6RSH7 139 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 CMTM1Q8IZ96 169 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 ST8SIA2Q92186 375 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 RND1Q92730 232 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 RRNAD1Q96FB5 475 aaKnown RBP11.12□□□□□ -0.63
CPNE1-225ENST00000483495 AQP10Q96PS8 301 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 OR2V2Q96R30 315 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 TAF9BQ9HBM6 251 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 OR1A1Q9P1Q5 309 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 TMED3Q9Y3Q3 217 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 TRAV39A0A0B4J263 110 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 LHBP01229 141 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 OR1S1Q8NH92 325 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 COQ2Q96H96 371 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 ARPC5LQ9BPX5 153 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 SHARPINQ9H0F6 387 aa11.12□□□□□ -0.63
CPNE1-225ENST00000483495 ERRFI1Q9UJM3 462 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-225ENST00000483495 HEATR1Q9H583 2144 aaKnown RBP11.11□□□□□ -0.63
CPNE1-225ENST00000483495 DUXBA0A1W2PPF3 345 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 DPRXA6NFQ7 191 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 LEUTXA8MZ59 168 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 HSD17B6O14756 317 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 PGLYRP1O75594 196 aaPredicted RBP11.11□□□□□ -0.63
CPNE1-225ENST00000483495 DEDDO75618 318 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 CDS2O95674 445 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 EGR1P18146 543 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 UCP1P25874 307 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 COL10A1Q03692 680 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 KLRB1Q12918 225 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 BEX5Q5H9J7 111 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 ALKAL2Q6UX46 152 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 GCSAMQ8N6F7 178 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 CD177Q8N6Q3 437 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 OR10V1Q8NGI7 309 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 IL1F10Q8WWZ1 152 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 PHYHIPLQ96FC7 376 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 CITED4Q96RK1 184 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 TOLLIPQ9H0E2 274 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 KCNIP1Q9NZI2 227 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 PIEZO2Q9H5I5 2752 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 ZGRF1Q86YA3 2104 aa11.11□□□□□ -0.63
CPNE1-225ENST00000483495 OOEPA6NGQ2 149 aa11.1□□□□□ -0.63
CPNE1-225ENST00000483495 H0Y980 276 aa11.1□□□□□ -0.63
CPNE1-225ENST00000483495 KCNAB3O43448 404 aa11.1□□□□□ -0.63
CPNE1-225ENST00000483495 SPRY3O43610 288 aa11.1□□□□□ -0.63
CPNE1-225ENST00000483495 ZNF737O75373 536 aa11.1□□□□□ -0.63
CPNE1-225ENST00000483495 SPDEFO95238 335 aa11.1□□□□□ -0.63
CPNE1-225ENST00000483495 RLN2P04090 185 aa11.1□□□□□ -0.63
CPNE1-225ENST00000483495 PSG2P11465 335 aa11.1□□□□□ -0.63
CPNE1-225ENST00000483495 PRDX2P32119 198 aa11.1□□□□□ -0.63
CPNE1-225ENST00000483495 LUMP51884 338 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-225ENST00000483495 S100A10P60903 97 aa11.1□□□□□ -0.63
CPNE1-225ENST00000483495 SPRNQ5BIV9 151 aa11.1□□□□□ -0.63
CPNE1-225ENST00000483495 TMEM268Q5VZI3 342 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms